Distinct 18S rRNA precursors are targets of the exosome complex, the exoribonuclease RRP6L2 and the terminal nucleotidyltransferase TRL inArabidopsis thaliana

atBRX1-1 and atBRX1-2 are involved in an alternative rRNA processing pathway inArabidopsis thaliana

(2015) Benjamin L. Weis et al.   RNA

Uridylation by TUT4 and TUT7 Marks mRNA for Degradation

(2014) Jaechul Lim et al.   CELL

Diverse diseases from a ubiquitous process: The ribosomopathy paradox

(2014) Joy Armistead et al.   FEBS LETTERS

Deep Sequencing Shows Multiple Oligouridylations Are Required for 3′ to 5′ Degradation of Histone mRNAs on Polyribosomes

(2014) Michael K. Slevin et al.   MOLECULAR CELL

A MicroRNA Precursor Surveillance System in Quality Control of MicroRNA Synthesis

(2014) Xuhang Liu et al.   MOLECULAR CELL

Methylation protects microRNAs from an AGO1-associated activity that uridylates 5' RNA fragments generated by AGO1 cleavage

(2014) G. Ren et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Arabidopsisprotein arginine methyltransferase 3 is required for ribosome biogenesis by affecting precursor ribosomal RNA processing

(2014) Runlai Hang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The RNA Helicases AtMTR4 and HEN2 Target Specific Subsets of Nuclear Transcripts for Degradation by the Nuclear Exosome in Arabidopsis thaliana

(2014) Heike Lange et al.   PLoS Genetics

An overview of pre-ribosomal RNA processing in eukaryotes

(2014) Anthony K. Henras et al.   Wiley Interdisciplinary Reviews-RNA

Separation of long RNA by agarose–formaldehyde gel electrophoresis

(2013) Farrah H. Mansour et al.   ANALYTICAL BIOCHEMISTRY

Growth control and ribosomopathies

(2013) Teng Teng et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Exonuclease hDIS3L2 specifies an exosome-independent 3′-5′ degradation pathway of human cytoplasmic mRNA

(2013) Michal Lubas et al.   EMBO JOURNAL

The exoribonuclease Dis3L2 defines a novel eukaryotic RNA degradation pathway

(2013) Michal Malecki et al.   EMBO JOURNAL

Both endonucleolytic and exonucleolytic cleavage mediate ITS1 removal during human ribosomal RNA processing

(2013) Katherine E. Sloan et al.   JOURNAL OF CELL BIOLOGY

The Complexity of Human Ribosome Biogenesis Revealed by Systematic Nucleolar Screening of Pre-rRNA Processing Factors

(2013) Lionel Tafforeau et al.   MOLECULAR CELL

A role for the Perlman syndrome exonuclease Dis3l2 in the Lin28–let-7 pathway

(2013) Hao-Ming Chang et al.   NATURE

Uridylation prevents 3' trimming of oligoadenylated mRNAs

(2013) F. M. Sement et al.   NUCLEIC ACIDS RESEARCH

Gradual processing of the ITS1 from the nucleolus to the cytoplasm during synthesis of the human 18S rRNA

(2013) Milena Preti et al.   NUCLEIC ACIDS RESEARCH

Cytoplasmic and nuclear quality control and turnover of single-stranded RNA modulate post-transcriptional gene silencing in plants

(2013) Ana Beatriz Moreno et al.   NUCLEIC ACIDS RESEARCH

The evolution of the ribosome biogenesis pathway from a yeast perspective

(2013) Ingo Ebersberger et al.   NUCLEIC ACIDS RESEARCH

40S Ribosome Biogenesis Co-Factors Are Essential for Gametophyte and Embryo Development

(2013) Sandra Missbach et al.   PLoS One

Arabidopsis AtRRP44A Is the Functional Homolog of Rrp44/Dis3, an Exosome Component, Is Essential for Viability and Is Required for RNA Processing and Degradation

(2013) Naoyoshi Kumakura et al.   PLoS One

Mammalian DIS3L2 exoribonuclease targets the uridylated precursors of let-7 miRNAs

(2013) D. Ustianenko et al.   RNA

A poly(A)-specific ribonuclease directly regulates the poly(A) status of mitochondrial mRNA in Arabidopsis

(2013) Takashi Hirayama et al.   Nature Communications

Mapping the cleavage sites on mammalian pre-rRNAs: Where do we stand?

(2012) Sahra-Taylor Mullineux et al.   BIOCHIMIE

Uridylation of miRNAs by HEN1 SUPPRESSOR1 in Arabidopsis

(2012) Guodong Ren et al.   CURRENT BIOLOGY

The Arabidopsis Nucleotidyl Transferase HESO1 Uridylates Unmethylated Small RNAs to Trigger Their Degradation

(2012) Yuanyuan Zhao et al.   CURRENT BIOLOGY

Interaction Profiling Identifies the Human Nuclear Exosome Targeting Complex

(2011) Michal Lubas et al.   MOLECULAR CELL

MTR4, a putative RNA helicase and exosome co-factor, is required for proper rRNA biogenesis and development inArabidopsis thaliana

(2011) Heike Lange et al.   PLANT JOURNAL

PAPD5, a noncanonical poly(A) polymerase with an unusual RNA-binding motif

(2011) C. Rammelt et al.   RNA

3′ uridylation and the regulation of RNA function in the cytoplasm

(2010) Chris J. Norbury   BIOCHEMICAL SOCIETY TRANSACTIONS

The human core exosome interacts with differentially localized processive RNases: hDIS3 and hDIS3L

(2010) Rafal Tomecki et al.   EMBO JOURNAL

Dis3-like 1: a novel exoribonuclease associated with the human exosome

(2010) Raymond H J Staals et al.   EMBO JOURNAL

Polyadenylation and degradation of incomplete RNA polymerase I transcripts in mammalian cells

(2010) Natalia Shcherbik et al.   EMBO REPORTS

Yeast Pre-rRNA Processing and Modification Occur Cotranscriptionally

(2010) Martin Koš et al.   MOLECULAR CELL

Arabidopsis thaliana XRN2 is required for primary cleavage in the pre-ribosomal RNA

(2010) Monika Zakrzewska-Placzek et al.   NUCLEIC ACIDS RESEARCH

Analysis of two human pre-ribosomal factors, bystin and hTsr1, highlights differences in evolution of ribosome biogenesis between yeast and mammals

(2010) C. Carron et al.   NUCLEIC ACIDS RESEARCH

Conserved RNaseII domain protein functions in cytoplasmic mRNA decay and suppresses Arabidopsis decapping mutant phenotypes

(2010) W. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Uridylation of mature miRNAs and siRNAs by the MUT68 nucleotidyltransferase promotes their degradation in Chlamydomonas

(2010) Fadia Ibrahim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A ‘garbage can’ for ribosomes: how eukaryotes degrade their ribosomes

(2010) Denis L.J. Lafontaine   TRENDS IN BIOCHEMICAL SCIENCES

The Final Step in 5.8S rRNA Processing Is Cytoplasmic in Saccharomyces cerevisiae

(2009) E. Thomson et al.   MOLECULAR AND CELLULAR BIOLOGY

Decapping is preceded by 3′ uridylation in a novel pathway of bulk mRNA turnover

(2009) Olivia S Rissland et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

LIN-28 and the poly(U) polymerase PUP-2 regulate let-7 microRNA processing in Caenorhabditis elegans

(2009) Nicolas J Lehrbach et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Transcript-Based Cloning of RRP46, a Regulator of rRNA Processing and R Gene-Independent Cell Death in Barley-Powdery Mildew Interactions

(2009) L. Xi et al.   PLANT CELL

Polyadenylation in Arabidopsis andChlamydomonasorganelles: the input of nucleotidyltransferases, poly(A) polymerases and polynucleotide phosphorylase

(2009) Sarah L. Zimmer et al.   PLANT JOURNAL

Identification of protein factors and U3 snoRNAs from aBrassica oleraceaRNP complex involved in the processing of pre-rRNA

(2009) Hala Samaha et al.   PLANT JOURNAL

The nuclear poly(A) polymerase and Exosome cofactor Trf5 is recruited cotranscriptionally to nucleolar surveillance

(2009) M. Wery et al.   RNA

A role for the ribosome in development

(2009) Mary E. Byrne   TRENDS IN PLANT SCIENCE

Polyadenylation-assisted RNA degradation processes in plants

(2009) Heike Lange et al.   TRENDS IN PLANT SCIENCE

Degradation of histone mRNA requires oligouridylation followed by decapping and simultaneous degradation of the mRNA both 5' to 3' and 3' to 5'

(2008) T. E. Mullen et al.   GENES & DEVELOPMENT

Degradation of a Polyadenylated rRNA Maturation By-Product Involves One of the Three RRP6-Like Proteins in Arabidopsis thaliana

(2008) H. Lange et al.   MOLECULAR AND CELLULAR BIOLOGY

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

(2008) A. Dereeper et al.   NUCLEIC ACIDS RESEARCH