The influence of salinity on the abundance, transcriptional activity, and diversity of AOA and AOB in an estuarine sediment: a microcosm study

Ammonia manipulates the ammonia-oxidizing archaea and bacteria in the coastal sediment-water microcosms

(2015) Yan Zhang et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Bacterial Domination Over Archaea in Ammonia Oxidation in a Monsoon-Driven Tropical Estuary

(2014) Vipindas Puthiya Veettil et al.   MICROBIAL ECOLOGY

Spatial Distribution and Factors Shaping the Niche Segregation of Ammonia-Oxidizing Microorganisms in the Qiantang River, China

(2013) Shuai Liu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effects of allylthiourea, salinity, and pH on ammonia/ammonium-oxidizing prokaryotes in mangrove sediment incubated in laboratory microcosms

(2013) Yong-Feng Wang et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Multi-factorial drivers of ammonia oxidizer communities: evidence from a national soil survey

(2013) Huaiying Yao et al.   ENVIRONMENTAL MICROBIOLOGY

pH-dependent distribution of soil ammonia oxidizers across a large geographical scale as revealed by high-throughput pyrosequencing

(2013) Hang-Wei Hu et al.   JOURNAL OF SOILS AND SEDIMENTS

Ecophysiology of an Ammonia-Oxidizing Archaeon Adapted to Low-Salinity Habitats

(2012) Annika C. Mosier et al.   MICROBIAL ECOLOGY

Links between Ammonia Oxidizer Community Structure, Abundance, and Nitrification Potential in Acidic Soils

(2011) Huaiying Yao et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Niche segregation of ammonia-oxidizing archaea and anammox bacteria in the Arabian Sea oxygen minimum zone

(2011) Angela Pitcher et al.   ISME Journal

Ammonia concentration determines differential growth of ammonia-oxidising archaea and bacteria in soil microcosms

(2011) Daniel T Verhamme et al.   ISME Journal

Ammonia oxidation coupled to CO2 fixation by archaea and bacteria in an agricultural soil

(2011) J. Pratscher et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Archaea rather than bacteria control nitrification in two agricultural acidic soils

(2010) Cécile Gubry-Rangin et al.   FEMS MICROBIOLOGY ECOLOGY

Ammonia-oxidizing bacteria and archaea grow under contrasting soil nitrogen conditions

(2010) Hong J. Di et al.   FEMS MICROBIOLOGY ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota

(2010) Anja Spang et al.   TRENDS IN MICROBIOLOGY

Heterogeneity of archaeal and bacterial ammonia-oxidizing communities in Lake Taihu, China

(2010) Yucheng Wu et al.   Environmental Microbiology Reports

Abundance of Ammonia-Oxidizing Archaea and Bacteria along an Estuarine Salinity Gradient in Relation to Potential Nitrification Rates

(2009) A. E. Bernhard et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Distribution and Diversity of Archaeal and Bacterial Ammonia Oxidizers in Salt Marsh Sediments

(2009) N. S. Moin et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Temporal variability in the abundance of ammonia- oxidizing bacteria vs. archaea in sandy sediments of the Douro River estuary, Portugal

(2009) CM Magalhães et al.   AQUATIC MICROBIAL ECOLOGY

Diversity and Abundance of Ammonia-Oxidizing Archaea and Bacteria in Qinghai Lake, Northwestern China

(2009) Hongchen Jiang et al.   GEOMICROBIOLOGY JOURNAL

Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria

(2009) Willm Martens-Habbena et al.   NATURE

Nitrification driven by bacteria and not archaea in nitrogen-rich grassland soils

(2009) H. J. Di et al.   Nature Geoscience

MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences

(2008) S. Kumar et al.   BRIEFINGS IN BIOINFORMATICS

Relative abundance and diversity of ammonia-oxidizing archaea and bacteria in the San Francisco Bay estuary

(2008) Annika C. Mosier et al.   ENVIRONMENTAL MICROBIOLOGY

Shifts in the relative abundance of ammonia-oxidizing bacteria and archaea across physicochemical gradients in a subterranean estuary

(2008) Alyson E. Santoro et al.   ENVIRONMENTAL MICROBIOLOGY

Abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea communities of an alkaline sandy loam

(2008) Ju-pei Shen et al.   ENVIRONMENTAL MICROBIOLOGY

Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota

(2008) Céline Brochier-Armanet et al.   NATURE REVIEWS MICROBIOLOGY