Deamination features of 5-hydroxymethylcytosine, a radical and enzymatic DNA oxidation product

Potent methyl oxidation of 5-methyl-2′-deoxycytidine by halogenated quinoid carcinogens and hydrogen peroxide via a metal-independent mechanism

(2013) Jie Shao et al.   FREE RADICAL BIOLOGY AND MEDICINE

Deamination, Oxidation, and C–C Bond Cleavage Reactivity of 5-Hydroxymethylcytosine, 5-Formylcytosine, and 5-Carboxycytosine

(2013) Stefan Schiesser et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

5-Hydroxymethylcytosine – the elusive epigenetic mark in mammalian DNA

(2012) Edita Kriukienė et al.   CHEMICAL SOCIETY REVIEWS

Nucleic acid modifications with epigenetic significance

(2012) Ye Fu et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Low values of 5-hydroxymethylcytosine (5hmC), the “sixth base,” are associated with anaplasia in human brain tumors

(2012) Theo F.J. Kraus et al.   INTERNATIONAL JOURNAL OF CANCER

Recognition and potential mechanisms for replication and erasure of cytosine hydroxymethylation

(2012) Hideharu Hashimoto et al.   NUCLEIC ACIDS RESEARCH

TET2 Mutations Are Associated with Specific 5-Methylcytosine and 5-Hydroxymethylcytosine Profiles in Patients with Chronic Myelomonocytic Leukemia

(2012) Cristina Pérez et al.   PLoS One

Comparison of the mechanism of deamination of 5,6-dihydro-5-methylcytosine with other cytosine derivatives

(2012) André Grand et al.   THEORETICAL CHEMISTRY ACCOUNTS

The Curious Chemical Biology of Cytosine: Deamination, Methylation,and Oxidation as Modulators of Genomic Potential

(2011) Christopher S. Nabel et al.   ACS Chemical Biology

The Discovery of 5-Formylcytosine in Embryonic Stem Cell DNA

(2011) Toni Pfaffeneder et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

5-Hydroxymethylcytosine, the Sixth Base of the Genome

(2011) Martin Münzel et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Burning off DNA Methylation: New Evidence for Oxygen-Dependent DNA Demethylation

(2011) Tomasz P. Jurkowski et al.   CHEMBIOCHEM

DNA Methylation and Demethylation in Mammals

(2011) Zhao-xia Chen et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Thymine DNA Glycosylase Can Rapidly Excise 5-Formylcytosine and 5-Carboxylcytosine

(2011) Atanu Maiti et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Acute depletion of Tet1-dependent 5-hydroxymethylcytosine levels impairs LIF/Stat3 signaling and results in loss of embryonic stem cell identity

(2011) Johannes M. Freudenberg et al.   NUCLEIC ACIDS RESEARCH

Application of the electron density force to chemical reactivity

(2011) Christophe Morell et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine

(2011) Khursheed Iqbal et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Tet-Mediated Formation of 5-Carboxylcytosine and Its Excision by TDG in Mammalian DNA

(2011) Y.-F. He et al.   SCIENCE

Tet Proteins Can Convert 5-Methylcytosine to 5-Formylcytosine and 5-Carboxylcytosine

(2011) S. Ito et al.   SCIENCE

Oxidation Reactions of Cytosine DNA Components by Hydroxyl Radical and One-Electron Oxidants in Aerated Aqueous Solutions

(2010) J. Richard Wagner et al.   ACCOUNTS OF CHEMICAL RESEARCH

Quantification of the Sixth DNA Base Hydroxymethylcytosine in the Brain

(2010) Martin Münzel et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Oxidatively generated base damage to cellular DNA

(2010) Jean Cadet et al.   FREE RADICAL BIOLOGY AND MEDICINE

Hydrolytic Deamination of 5,6-Dihydrocytosine in a Protic Medium: A Theoretical Study

(2010) Vanessa Labet et al.   JOURNAL OF PHYSICAL CHEMISTRY A

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

(2010) Julie A. Law et al.   NATURE REVIEWS GENETICS

Physiological and biochemical aspects of hydroxylations and demethylations catalyzed by human 2-oxoglutarate oxygenases

(2010) Christoph Loenarz et al.   TRENDS IN BIOCHEMICAL SCIENCES

Hydrolytic Deamination of 5-Methylcytosine in Protic MediumA Theoretical Study

(2009) Vanessa Labet et al.   JOURNAL OF PHYSICAL CHEMISTRY A

Chemical Reactivity Descriptors for Ambiphilic Reagents: Dual Descriptor, Local Hypersoftness, and Electrostatic Potential

(2009) Carlos Cárdenas et al.   JOURNAL OF PHYSICAL CHEMISTRY A

Minimum electrophilicity principle: an analysis based upon the variation of both chemical potential and absolute hardness

(2009) Christophe Morell et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Conversion of 5-Methylcytosine to 5-Hydroxymethylcytosine in Mammalian DNA by MLL Partner TET1

(2009) M. Tahiliani et al.   SCIENCE

The Nuclear DNA Base 5-Hydroxymethylcytosine Is Present in Purkinje Neurons and the Brain

(2009) S. Kriaucionis et al.   SCIENCE

The pH Effect on the Naphthoquinone-Photosensitized Oxidation of 5-Methylcytosine

(2008) Hisatsugu Yamada et al.   CHEMISTRY-A EUROPEAN JOURNAL

Theoretical Study of Cytosine Deamination from the Perspective of the Reaction Force Analysis

(2008) Vanessa Labet et al.   JOURNAL OF PHYSICAL CHEMISTRY A

Proton catalyzed hydrolytic deamination of cytosine: a computational study

(2008) V. Labet et al.   THEORETICAL CHEMISTRY ACCOUNTS