Multidimensional approaches for studying plant defence against insects: from ecology to omics and synthetic biology
Published 2014 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Multidimensional approaches for studying plant defence against insects: from ecology to omics and synthetic biology
Authors
Keywords
-
Journal
JOURNAL OF EXPERIMENTAL BOTANY
Volume 66, Issue 2, Pages 479-493
Publisher
Oxford University Press (OUP)
Online
2014-12-24
DOI
10.1093/jxb/eru489
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Plant metabolomics. Methods and protocols
- (2014) Alexandre Foito ANNALS OF BOTANY
- Assessment of pleiotropic transcriptome perturbations in Arabidopsis engineered for indirect insect defence
- (2014) Benyamin Houshyani et al. BMC PLANT BIOLOGY
- TraitCapture: genomic and environment modelling of plant phenomic data
- (2014) Tim B Brown et al. CURRENT OPINION IN PLANT BIOLOGY
- Editorial overview: Growing the future: synthetic biology in plants
- (2014) Sarah E O’Connor et al. CURRENT OPINION IN PLANT BIOLOGY
- Using Resistant Prey Demonstrates That Bt Plants Producing Cry1Ac, Cry2Ab, and Cry1F Have No Negative Effects onGeocoris punctipesandOrius insidiosus
- (2014) Jun-Ce Tian et al. ENVIRONMENTAL ENTOMOLOGY
- Advancing plant ecology through meta-analyses
- (2014) Lorena Gómez-Aparicio et al. JOURNAL OF ECOLOGY
- Tri-Trophic Studies Using Cry1Ac-Resistant Plutella xylostella Demonstrate No Adverse Effects of Cry1Ac on the Entomopathogenic Nematode, Heterorhabditis bacteriophora
- (2014) Saurabh Gautam et al. JOURNAL OF ECONOMIC ENTOMOLOGY
- Mass spectrometry in plant metabolomics strategies: from analytical platforms to data acquisition and processing
- (2014) Madeleine Ernst et al. NATURAL PRODUCT REPORTS
- Engineering explored
- (2014) Pamela A. Silver et al. NATURE
- Scientific method: Statistical errors
- (2014) Regina Nuzzo NATURE
- The devil in the details of RNA-seq
- (2014) Anton Kratz et al. NATURE BIOTECHNOLOGY
- Insect herbivore-associated organisms affect plant responses to herbivory
- (2014) Feng Zhu et al. NEW PHYTOLOGIST
- Real-time,in vivointracellular recordings of caterpillar-induced depolarization waves in sieve elements using aphid electrodes
- (2014) Vicenta Salvador-Recatalà et al. NEW PHYTOLOGIST
- Direct and indirect chemical defences against insects in a multitrophic framework
- (2014) RIETA GOLS PLANT CELL AND ENVIRONMENT
- Ecology of plant volatiles: taking a plant community perspective
- (2014) RONALD PIERIK et al. PLANT CELL AND ENVIRONMENT
- The roots of plant defenses: integrative multivariate analyses uncover dynamic behaviors of gene and metabolic networks of roots elicited by leaf herbivory
- (2014) Jyotasana Gulati et al. PLANT JOURNAL
- Emerging tools for synthetic biology in plants
- (2014) Ian Small et al. PLANT JOURNAL
- A robust, simple, high-throughput technique for time-resolved plant volatile analysis in field experiments
- (2014) Mario Kallenbach et al. PLANT JOURNAL
- Efficient CRISPR/Cas9-Mediated Gene Editing in Arabidopsis thaliana and Inheritance of Modified Genes in the T2 and T3 Generations
- (2014) WenZhi Jiang et al. PLoS One
- Field-evolved resistance by western corn rootworm to multiple Bacillus thuringiensis toxins in transgenic maize
- (2014) A. J. Gassmann et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- DBM-DB: the diamondback moth genome database
- (2014) W. Tang et al. Database-The Journal of Biological Databases and Curation
- Lab to Farm: Applying Research on Plant Genetics and Genomics to Crop Improvement
- (2014) Pamela C. Ronald PLOS BIOLOGY
- Next-Generation Sequencing Platforms
- (2013) Elaine R. Mardis Annual Review of Analytical Chemistry
- Response of Native Insect Communities to Invasive Plants
- (2013) T. Martijn Bezemer et al. Annual Review of Entomology
- Engineering Plant Disease Resistance Based on TAL Effectors
- (2013) Sebastian Schornack et al. Annual Review of Phytopathology
- Future Scenarios for Plant Phenotyping
- (2013) Fabio Fiorani et al. Annual Review of Plant Biology
- Plant Interactions with Multiple Insect Herbivores: From Community to Genes
- (2013) Jeltje M. Stam et al. Annual Review of Plant Biology
- Plant secretome — From cellular process to biological activity
- (2013) Cornelia Krause et al. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS
- Integrated transcriptomics and metabolomics decipher differences in the resistance of pedunculate oak to the herbivore Tortrix viridana L.
- (2013) Birgit Kersten et al. BMC GENOMICS
- KONAGAbase: a genomic and transcriptomic database for the diamondback moth, Plutella xylostella
- (2013) Akiya Jouraku et al. BMC GENOMICS
- Comparative transcriptome analysis of Gossypium hirsutum L. in response to sap sucking insects: aphid and whitefly
- (2013) Neeraj Kumar Dubey et al. BMC GENOMICS
- Proteomic and metabolomic profiles of larval hemolymph associated with diapause in the cotton bollworm, Helicoverpa armigera
- (2013) Qi Zhang et al. BMC GENOMICS
- Transcriptomic and proteomic analysis of a compatible tomato-aphid interaction reveals a predominant salicylic acid-dependent plant response
- (2013) Valentina Coppola et al. BMC GENOMICS
- Efficient genome editing in plants using a CRISPR/Cas system
- (2013) Zhengyan Feng et al. CELL RESEARCH
- Insect herbivores, chemical innovation, and the evolution of habitat specialization in Amazonian trees
- (2013) Paul V. A. Fine et al. ECOLOGY
- Comparative analyses of salivary proteins from three aphid species
- (2013) S. Vandermoten et al. INSECT MOLECULAR BIOLOGY
- Comparative metatranscriptomic signatures of wood and paper feeding in the gut of the termiteReticulitermes flavipes(Isoptera: Rhinotermitidae)
- (2013) R. Raychoudhury et al. INSECT MOLECULAR BIOLOGY
- Proteome Analysis of Rice (Oryza sativa L.) Mutants Reveals Differentially Induced Proteins during Brown Planthopper (Nilaparvata lugens) Infestation
- (2013) Jatinder Sangha et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Microbial Brokers of Insect-Plant Interactions Revisited
- (2013) Angela E. Douglas JOURNAL OF CHEMICAL ECOLOGY
- Proteomics of model and crop plant species: Status, current limitations and strategic advances for crop improvement
- (2013) Hervé Vanderschuren et al. Journal of Proteomics
- Application of an Improved Proteomics Method for Abundant Protein Cleanup: Molecular and Genomic Mechanisms Study in Plant Defense
- (2013) Yixiang Zhang et al. MOLECULAR & CELLULAR PROTEOMICS
- An ecogenomic analysis of herbivore-induced plant volatiles inBrassica juncea
- (2013) Vartika Mathur et al. MOLECULAR ECOLOGY
- Case studies: A hard look at GM crops
- (2013) Natasha Gilbert NATURE
- Biosynthesis, function and metabolic engineering of plant volatile organic compounds
- (2013) Natalia Dudareva et al. NEW PHYTOLOGIST
- Explaining intraspecific diversity in plant secondary metabolites in an ecological context
- (2013) Ben D. Moore et al. NEW PHYTOLOGIST
- Gramene 2013: comparative plant genomics resources
- (2013) Marcela K. Monaco et al. NUCLEIC ACIDS RESEARCH
- Natural Variation in Maize Aphid Resistance Is Associated with 2,4-Dihydroxy-7-Methoxy-1,4-Benzoxazin-3-One Glucoside Methyltransferase Activity
- (2013) L. N. Meihls et al. PLANT CELL
- Synthetic nucleases for genome engineering in plants: prospects for a bright future
- (2013) Holger Puchta et al. PLANT JOURNAL
- GoldenBraid 2.0: A Comprehensive DNA Assembly Framework for Plant Synthetic Biology
- (2013) A. Sarrion-Perdigones et al. PLANT PHYSIOLOGY
- Transcriptome Responses to Combinations of Stresses in Arabidopsis
- (2013) S. Rasmussen et al. PLANT PHYSIOLOGY
- Molecular Signatures in Arabidopsis thaliana in Response to Insect Attack and Bacterial Infection
- (2013) Pankaj Barah et al. PLoS One
- BmTEdb: a collective database of transposable elements in the silkworm genome
- (2013) Hong-En Xu et al. Database-The Journal of Biological Databases and Curation
- Bt cotton and sustainability of pesticide reductions in India
- (2012) Vijesh V. Krishna et al. AGRICULTURAL SYSTEMS
- Designing a transcriptome next-generation sequencing project for a nonmodel plant species1
- (2012) Susan R. Strickler et al. AMERICAN JOURNAL OF BOTANY
- Applications of next-generation sequencing in plant biology
- (2012) Ashley N. Egan et al. AMERICAN JOURNAL OF BOTANY
- An Emerging Understanding of Mechanisms Governing Insect Herbivory Under Elevated CO2
- (2012) Jorge A. Zavala et al. Annual Review of Entomology
- Plant Defense Against Herbivores: Chemical Aspects
- (2012) Axel Mithöfer et al. Annual Review of Plant Biology
- An elm EST database for identifying leaf beetle egg-induced defense genes
- (2012) Kerstin Büchel et al. BMC GENOMICS
- Combining proteomics and transcriptome sequencing to identify active plant-cell-wall-degrading enzymes in a leaf beetle
- (2012) Roy Kirsch et al. BMC GENOMICS
- Learning from nature: new approaches to the metabolic engineering of plant defense pathways
- (2012) Jan Jirschitzka et al. CURRENT OPINION IN BIOTECHNOLOGY
- Field-based phenomics for plant genetics research
- (2012) Jeffrey W. White et al. FIELD CROPS RESEARCH
- Metatranscriptomic analysis of small RNAs present in soybean deep sequencing libraries
- (2012) Lorrayne Gomes Molina et al. GENETICS AND MOLECULAR BIOLOGY
- Mechanisms for flowering plants to benefit arthropod natural enemies of insect pests: Prospects for enhanced use in agriculture
- (2012) Zhong-Xian Lu et al. Insect Science
- Evolution of mixed strategies of plant defense against herbivores
- (2012) Nash E. Turley et al. NEW PHYTOLOGIST
- Arabidopsis Defense against Botrytis cinerea: Chronology and Regulation Deciphered by High-Resolution Temporal Transcriptomic Analysis
- (2012) O. Windram et al. PLANT CELL
- Metabolomics reveals herbivore-induced metabolites of resistance and susceptibility in maize leaves and roots
- (2012) GUILLAUME MARTI et al. PLANT CELL AND ENVIRONMENT
- Transformational tools for next-generation plant ecology: manipulation of gene expression for the functional analysis of genes
- (2012) Klaus Gase et al. Plant Ecology & Diversity
- High throughput phenotyping for aphid resistance in large plant collections
- (2012) Xi Chen et al. Plant Methods
- Climate Change: Resetting Plant-Insect Interactions
- (2012) E. H. DeLucia et al. PLANT PHYSIOLOGY
- Metatranscriptomics Reveals the Diversity of Genes Expressed by Eukaryotes in Forest Soils
- (2012) Coralie Damon et al. PLoS One
- The Tri-Trophic Interactions Hypothesis: Interactive Effects of Host Plant Quality, Diet Breadth and Natural Enemies on Herbivores
- (2012) Kailen A. Mooney et al. PLoS One
- Insect Innate Immunity Database (IIID): An Annotation Tool for Identifying Immune Genes in Insect Genomes
- (2012) Robert M. Brucker et al. PLoS One
- Evaluating Methods for Isolating Total RNA and Predicting the Success of Sequencing Phylogenetically Diverse Plant Transcriptomes
- (2012) Marc T. J. Johnson et al. PLoS One
- Wounding, insect chewing and phloem sap feeding differentially alter the leaf proteome of potato, Solanum tuberosum L.
- (2012) Marc-Olivier Duceppe et al. Proteome Science
- A Gain-of-Function Polymorphism Controlling Complex Traits and Fitness in Nature
- (2012) K. V. S. K. Prasad et al. SCIENCE
- Natural Enemies Drive Geographic Variation in Plant Defenses
- (2012) T. Zust et al. SCIENCE
- Association mapping of plant resistance to insects
- (2012) Karen J. Kloth et al. TRENDS IN PLANT SCIENCE
- Specialist versus generalist insect herbivores and plant defense
- (2012) Jared G. Ali et al. TRENDS IN PLANT SCIENCE
- A BioBrick compatible strategy for genetic modification of plants
- (2012) Patrick M Boyle et al. Journal of Biological Engineering
- Plant Signalling Pathways: A Comparative Evolutionary Overview
- (2011) Alistair M. Hetherington et al. CURRENT BIOLOGY
- Comparison of the α-Amylase Inhibitor-1 from Common Bean (Phaseolus vulgaris) Varieties and Transgenic Expression in Other Legumes—Post-Translational Modifications and Immunogenicity
- (2011) Peter M. Campbell et al. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY
- Herbivore-Induced Changes in Tomato (Solanum lycopersicum) Primary Metabolism: A Whole Plant Perspective
- (2011) Adam D. Steinbrenner et al. JOURNAL OF CHEMICAL ECOLOGY
- Influence of Pymetrozine on Feeding Behaviors of Three Rice Planthoppers and a Rice Leafhopper Using Electrical Penetration Graphs
- (2011) Yueping He et al. JOURNAL OF ECONOMIC ENTOMOLOGY
- Insect oral secretions suppress wound-induced responses in Arabidopsis
- (2011) Floriane Consales et al. JOURNAL OF EXPERIMENTAL BOTANY
- Identification of enzymatic and regulatory genes of plant metabolism through QTL analysis in Arabidopsis
- (2011) Yariv Brotman et al. JOURNAL OF PLANT PHYSIOLOGY
- Plant-based insect repellents: a review of their efficacy, development and testing
- (2011) Marta Maia et al. MALARIA JOURNAL
- Who is eating what: diet assessment using next generation sequencing
- (2011) FRANCOIS POMPANON et al. MOLECULAR ECOLOGY
- Multiple reference genomes and transcriptomes for Arabidopsis thaliana
- (2011) Xiangchao Gan et al. NATURE
- Phytozome: a comparative platform for green plant genomics
- (2011) David M. Goodstein et al. NUCLEIC ACIDS RESEARCH
- An ecological genomic approach challenging the paradigm of differential plant responses to specialist versus generalist insect herbivores
- (2011) M. Gabriela Bidart-Bouzat et al. OECOLOGIA
- Comparative iTRAQ proteome and transcriptome analyses of sweet orange infected by “Candidatus Liberibacter asiaticus”
- (2011) Jing Fan et al. PHYSIOLOGIA PLANTARUM
- Advances in Omics and Bioinformatics Tools for Systems Analyses of Plant Functions
- (2011) K. Mochida et al. PLANT AND CELL PHYSIOLOGY
- Dissecting Plant Genomes with the PLAZA Comparative Genomics Platform
- (2011) M. Van Bel et al. PLANT PHYSIOLOGY
- Creating a Buzz About Insect Genomes
- (2011) G. E. Robinson et al. SCIENCE
- Unraveling plant–microbe interactions: can multi-species transcriptomics help?
- (2011) Peer M. Schenk et al. TRENDS IN BIOTECHNOLOGY
- Redefining plant systems biology: from cell to ecosystem
- (2011) Joost J.B. Keurentjes et al. TRENDS IN PLANT SCIENCE
- Phenomics – technologies to relieve the phenotyping bottleneck
- (2011) Robert T. Furbank et al. TRENDS IN PLANT SCIENCE
- Combining Genome-Wide Association Mapping and Transcriptional Networks to Identify Novel Genes Controlling Glucosinolates in Arabidopsis thaliana
- (2011) Eva K. F. Chan et al. PLOS BIOLOGY
- A meta-analysis of preference-performance relationships in phytophagous insects
- (2010) Sofia Gripenberg et al. ECOLOGY LETTERS
- Metabolomics: the chemistry between ecology and genetics
- (2010) MIRKA MACEL et al. Molecular Ecology Resources
- Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines
- (2010) Susanna Atwell et al. NATURE
- Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling
- (2010) Ignacio Medina et al. NUCLEIC ACIDS RESEARCH
- Hymenoptera Genome Database: integrated community resources for insect species of the order Hymenoptera
- (2010) M. C. Munoz-Torres et al. NUCLEIC ACIDS RESEARCH
- Why plant volatile analysis needs bioinformatics - detecting signal from noise in increasingly complex profiles
- (2010) N. M. Van Dam et al. PLANT BIOLOGY
- Modulation of Transcriptome and Metabolome of Tobacco by Arabidopsis Transcription Factor, AtMYB12, Leads to Insect Resistance
- (2010) P. Misra et al. PLANT PHYSIOLOGY
- PlantMetabolomics.org: A Web Portal for Plant Metabolomics Experiments
- (2010) P. Bais et al. PLANT PHYSIOLOGY
- Differential Proteomic Analysis of Arabidopsis thaliana Genotypes Exhibiting Resistance or Susceptibility to the Insect Herbivore, Plutella xylostella
- (2010) Richard M. Collins et al. PLoS One
- Combining Next-Generation Sequencing Strategies for Rapid Molecular Resource Development from an Invasive Aphid Species, Aphis glycines
- (2010) Xiaodong Bai et al. PLoS One
- Linkages among trait-mediated indirect effects: a new framework for the indirect interaction web
- (2010) Shunsuke Utsumi et al. POPULATION ECOLOGY
- Creation of a Bacterial Cell Controlled by a Chemically Synthesized Genome
- (2010) D. G. Gibson et al. SCIENCE
- Multiple stress factors and the emission of plant VOCs
- (2010) Jarmo K. Holopainen et al. TRENDS IN PLANT SCIENCE
- The evolutionary context for herbivore-induced plant volatiles: beyond the ‘cry for help’
- (2010) Marcel Dicke et al. TRENDS IN PLANT SCIENCE
- Fourmidable: a database for ant genomics
- (2009) Yannick Wurm et al. BMC GENOMICS
- KAIKObase: An integrated silkworm genome database and data mining tool
- (2009) Michihiko Shimomura et al. BMC GENOMICS
- Integrated omics approaches in plant systems biology
- (2009) Atsushi Fukushima et al. CURRENT OPINION IN CHEMICAL BIOLOGY
- Chemical diversity inBrassica oleraceaaffects biodiversity of insect herbivores
- (2009) Erik H. Poelman et al. ECOLOGY
- Ecological genomics of Boechera stricta: identification of a QTL controlling the allocation of methionine- vs branched-chain amino acid-derived glucosinolates and levels of insect herbivory
- (2009) M E Schranz et al. HEREDITY
- NMR Metabolomics of Thrips (Frankliniella occidentalis) Resistance in Senecio Hybrids
- (2009) Kirsten A. Leiss et al. JOURNAL OF CHEMICAL ECOLOGY
- The AC–DC Correlation Monitor: New EPG design with flexible input resistors to detect both R and emf components for any piercing–sucking hemipteran
- (2009) Elaine A. Backus et al. JOURNAL OF INSECT PHYSIOLOGY
- Tritrophic interactions among Macrosiphum euphorbiae aphids, their host plants and endosymbionts: Investigation by a proteomic approach
- (2009) F. Francis et al. JOURNAL OF INSECT PHYSIOLOGY
- Precise genome modification in the crop species Zea mays using zinc-finger nucleases
- (2009) Vipula K. Shukla et al. NATURE
- Chemical complexity of volatiles from plants induced by multiple attack
- (2009) Marcel Dicke et al. Nature Chemical Biology
- Signal signature of aboveground-induced resistance upon belowground herbivory in maize
- (2009) Matthias Erb et al. PLANT JOURNAL
- VirtualPlant: A Software Platform to Support Systems Biology Research
- (2009) M. S. Katari et al. PLANT PHYSIOLOGY
- Identification of Defense Compounds in Barbarea vulgaris against the Herbivore Phyllotreta nemorum by an Ecometabolomic Approach
- (2009) V. Kuzina et al. PLANT PHYSIOLOGY
- Identification of Chlorogenic Acid as a Resistance Factor for Thrips in Chrysanthemum
- (2009) K. A. Leiss et al. PLANT PHYSIOLOGY
- Molecular Interactions between the Specialist Herbivore Manduca sexta (Lepidoptera, Sphigidae) and Its Natural Host Nicotiana attenuata. VIII. An Unbiased GCxGC-ToFMS Analysis of the Plant's Elicited Volatile Emissions
- (2009) E. Gaquerel et al. PLANT PHYSIOLOGY
- Restoring a maize root signal that attracts insect-killing nematodes to control a major pest
- (2009) J. Degenhardt et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Plant secretome: Unlocking secrets of the secreted proteins
- (2009) Ganesh Kumar Agrawal et al. PROTEOMICS
- With ‘Phenomics,’ Plant Scientists Hope to Shift Breeding Into Overdrive
- (2009) Elizabeth Finkel SCIENCE
- WildSilkbase: An EST database of wild silkmoths
- (2008) KP Arunkumar et al. BMC GENOMICS
- Complexity in biology. Exceeding the limits of reductionism and determinism using complexity theory
- (2008) Fulvio Mazzocchi EMBO REPORTS
- Metabolomic analysis of the interaction between plants and herbivores
- (2008) Jeroen J. Jansen et al. Metabolomics
- Early season herbivore differentially affects plant defence responses to subsequently colonizing herbivores and their abundance in the field
- (2008) ERIK H. POELMAN et al. MOLECULAR ECOLOGY
- Cultivating plant synthetic biology from systems biology
- (2008) Tessa A. Bowen et al. NEW PHYTOLOGIST
- Indirect defence via tritrophic interactions
- (2008) Martin Heil NEW PHYTOLOGIST
- Towards global understanding of plant defence against aphids timing and dynamics of earlyArabidopsisdefence responses to cabbage aphid (Brevicoryne brassicae) attack
- (2008) ANNA KUNIERCZYK et al. PLANT CELL AND ENVIRONMENT
- Ecological Genomics of Plant-Insect Interactions: From Gene to Community
- (2008) S.-J. Zheng et al. PLANT PHYSIOLOGY
- Biotechnological Prospects for Engineering Insect-Resistant Plants
- (2008) J. A. Gatehouse PLANT PHYSIOLOGY
- Cross Talk in Defense Signaling
- (2008) A. Koornneef et al. PLANT PHYSIOLOGY
- From Genotype to Phenotype: Systems Biology Meets Natural Variation
- (2008) P. N. Benfey et al. SCIENCE
- Plant systems biology comes of age
- (2008) Joshua S. Yuan et al. TRENDS IN PLANT SCIENCE
- Plant Immunity to Insect Herbivores
- (2007) Gregg A. Howe et al. Annual Review of Plant Biology
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started