ARGONAUTE2 cooperates with SWI/SNF complex to determine nucleosome occupancy at human Transcription Start Sites
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
ARGONAUTE2 cooperates with SWI/SNF complex to determine nucleosome occupancy at human Transcription Start Sites
Authors
Keywords
-
Journal
NUCLEIC ACIDS RESEARCH
Volume 43, Issue 3, Pages 1498-1512
Publisher
Oxford University Press (OUP)
Online
2015-01-21
DOI
10.1093/nar/gku1387
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Argonaute-Bound Small RNAs from Promoter-Proximal RNA Polymerase II
- (2014) Jesse R. Zamudio et al. CELL
- Ago2 facilitates Rad51 recruitment and DNA double-strand break repair by homologous recombination
- (2014) Min Gao et al. CELL RESEARCH
- Argonaute proteins: functional insights and emerging roles
- (2013) Gunter Meister NATURE REVIEWS GENETICS
- Structural features of Argonaute-GW182 protein interactions
- (2013) J. Pfaff et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Swi/Snf chromatin remodeling/tumor suppressor complex establishes nucleosome occupancy at target promoters
- (2013) M. Y. Tolstorukov et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Ago1 Interacts with RNA Polymerase II and Binds to the Promoters of Actively Transcribed Genes in Human Cancer Cells
- (2013) Vera Huang et al. PLoS Genetics
- TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
- (2013) Daehwan Kim et al. GENOME BIOLOGY
- A Role for Small RNAs in DNA Double-Strand Break Repair
- (2012) Wei Wei et al. CELL
- SWI/SNF Chromatin-remodeling Factors: Multiscale Analyses and Diverse Functions
- (2012) Ghia Euskirchen et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Dynamic Changes in Nucleosome Occupancy Are Not Predictive of Gene Expression Dynamics but Are Linked to Transcription and Chromatin Regulators
- (2012) D. J. Huebert et al. MOLECULAR AND CELLULAR BIOLOGY
- Differential analysis of gene regulation at transcript resolution with RNA-seq
- (2012) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- Argonaute proteins couple chromatin silencing to alternative splicing
- (2012) Maya Ameyar-Zazoua et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- ENCODE Data in the UCSC Genome Browser: year 5 update
- (2012) Kate R. Rosenbloom et al. NUCLEIC ACIDS RESEARCH
- Ensembl 2013
- (2012) Paul Flicek et al. NUCLEIC ACIDS RESEARCH
- ViennaRNA Package 2.0
- (2011) Ronny Lorenz et al. Algorithms for Molecular Biology
- Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment
- (2011) Jürgen Cox et al. JOURNAL OF PROTEOME RESEARCH
- High-Resolution Profiling and Analysis of Viral and Host Small RNAs during Human Cytomegalovirus Infection
- (2011) T. J. Stark et al. JOURNAL OF VIROLOGY
- Hypoxia Potentiates MicroRNA-Mediated Gene Silencing through Posttranslational Modification of Argonaute2
- (2011) C. Wu et al. MOLECULAR AND CELLULAR BIOLOGY
- Dynamic BRG1 Recruitment during T Helper Differentiation and Activation Reveals Distal Regulatory Elements
- (2011) S. De et al. MOLECULAR AND CELLULAR BIOLOGY
- Chromatin-associated RNA interference components contribute to transcriptional regulation in Drosophila
- (2011) Filippo M. Cernilogar et al. NATURE
- Biogenic mechanisms and utilization of small RNAs derived from human protein-coding genes
- (2011) Eivind Valen et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- miRanalyzer: an update on the detection and analysis of microRNAs in high-throughput sequencing experiments
- (2011) M. Hackenberg et al. NUCLEIC ACIDS RESEARCH
- Diverse Roles and Interactions of the SWI/SNF Chromatin Remodeling Complex Revealed Using Global Approaches
- (2011) Ghia M. Euskirchen et al. PLoS Genetics
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- Involvement of argonaute proteins in gene silencing and activation by RNAs complementary to a non-coding transcript at the progesterone receptor promoter
- (2010) Yongjun Chu et al. NUCLEIC ACIDS RESEARCH
- miRBase: integrating microRNA annotation and deep-sequencing data
- (2010) A. Kozomara et al. NUCLEIC ACIDS RESEARCH
- The Biology of Chromatin Remodeling Complexes
- (2009) Cedric R. Clapier et al. Annual Review of Biochemistry
- GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists
- (2009) Eran Eden et al. BMC BIOINFORMATICS
- Mechanisms that Specify Promoter Nucleosome Location and Identity
- (2009) Paul D. Hartley et al. CELL
- RNA-mediated chromatin-based silencing in plants
- (2009) Marjori Matzke et al. CURRENT OPINION IN CELL BIOLOGY
- Tiny RNAs associated with transcription start sites in animals
- (2009) Ryan J Taft et al. NATURE GENETICS
- Nucleosome positioning and gene regulation: advances through genomics
- (2009) Cizhong Jiang et al. NATURE REVIEWS GENETICS
- Control of alternative splicing through siRNA-mediated transcriptional gene silencing
- (2009) Mariano Alló et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- An embryonic stem cell chromatin remodeling complex, esBAF, is an essential component of the core pluripotency transcriptional network
- (2009) L. Ho et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- Dynamic Regulation of Nucleosome Positioning in the Human Genome
- (2008) Dustin E. Schones et al. CELL
- High confidence determination of specific protein–protein interactions using quantitative mass spectrometry
- (2008) Michiel Vermeulen et al. CURRENT OPINION IN BIOTECHNOLOGY
- Two strategies for gene regulation by promoter nucleosomes
- (2008) I. Tirosh et al. GENOME RESEARCH
- MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
- (2008) Jürgen Cox et al. NATURE BIOTECHNOLOGY
- Divergent Transcription from Active Promoters
- (2008) Amy C. Seila et al. SCIENCE
- Nascent RNA Sequencing Reveals Widespread Pausing and Divergent Initiation at Human Promoters
- (2008) Leighton J. Core et al. SCIENCE
- Bidirectional Transcription Directs Both Transcriptional Gene Activation and Suppression in Human Cells
- (2008) Kevin V. Morris et al. PLoS Genetics
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started