Mutations in the CRE pocket of bacterial RNA polymerase affect multiple steps of transcription

Crystal Structures of the E. coli Transcription Initiation Complexes with a Complete Bubble

(2015) Yuhong Zuo et al.   MOLECULAR CELL

Distinct pathways of RNA polymerase regulation by a phage-encoded factor

(2015) Daria Esyunina et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial Sigma Factors: A Historical, Structural, and Genomic Perspective

(2014) Andrey Feklístov et al.   Annual Review of Microbiology

Structural Basis of Transcription Initiation by Bacterial RNA Polymerase Holoenzyme

(2014) Ritwika S. Basu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

RNA polymerase pausing and nascent-RNA structure formation are linked through clamp-domain movement

(2014) Pyae P Hein et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Distinct functions of the RNA polymerase σ subunit region 3.2 in RNA priming and promoter escape

(2014) Danil Pupov et al.   NUCLEIC ACIDS RESEARCH

A pause sequence enriched at translation start sites drives transcription dynamics in vivo

(2014) M. H. Larson et al.   SCIENCE

Interactions between RNA polymerase and the "core recognition element" counteract pausing

(2014) I. O. Vvedenskaya et al.   SCIENCE

GE23077 binds to the RNA polymerase ‘i’ and ‘i+1’ sites and prevents the binding of initiating nucleotides

(2014) Yu Zhang et al.   eLife

Structural Basis of Transcriptional Pausing in Bacteria

(2013) Albert Weixlbaumer et al.   CELL

Antisense Oligonucleotide-stimulated Transcriptional Pausing Reveals RNA Exit Channel Specificity of RNA Polymerase and Mechanistic Contributions of NusA and RfaH

(2013) Kellie E. Kolb et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

X-ray Crystal Structure ofEscherichia coliRNA Polymerase σ70Holoenzyme

(2013) Katsuhiko S. Murakami   JOURNAL OF BIOLOGICAL CHEMISTRY

Cys-Pair Reporters Detect a Constrained Trigger Loop in a Paused RNA Polymerase

(2013) Dhananjaya Nayak et al.   MOLECULAR CELL

An aromatic residue switch in enhancer-dependent bacterial RNA polymerase controls transcription intermediate complex activity

(2013) Simone C. Wiesler et al.   NUCLEIC ACIDS RESEARCH

RNA Polymerase Backtracking in Gene Regulation and Genome Instability

(2012) Evgeny Nudler   CELL

C6 pyridinium ceramide influences alternative pre-mRNA splicing by inhibiting protein phosphatase-1

(2012) Chiranthani Sumanasekera et al.   NUCLEIC ACIDS RESEARCH

Structural Basis of Transcription Initiation

(2012) Y. Zhang et al.   SCIENCE

RNA Transcript 3′-Proximal Sequence Affects Translocation Bias of RNA Polymerase

(2011) Pyae P. Hein et al.   BIOCHEMISTRY

Interaction of RNA Polymerase II Fork Loop 2 with Downstream Non-template DNA Regulates Transcription Elongation

(2011) Maria L. Kireeva et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

σ70-dependent Transcription Pausing in Escherichia coli

(2011) Sarah A. Perdue et al.   JOURNAL OF MOLECULAR BIOLOGY

Bacterial Transcription Terminators: The RNA 3′-End Chronicles

(2011) Jason M. Peters et al.   JOURNAL OF MOLECULAR BIOLOGY

Structural basis of RNA polymerase II backtracking, arrest and reactivation

(2011) Alan C. M. Cheung et al.   NATURE

Templated nucleoside triphosphate binding to a noncatalytic site on RNA polymerase regulates transcription

(2011) S. R. Kennedy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functional regions of the N-terminal domain of the antiterminator RfaH

(2010) Georgiy A. Belogurov et al.   MOLECULAR MICROBIOLOGY

RNA polymerase mutations that facilitate replication progression in the rep uvrD recF mutant lacking two accessory replicative helicases

(2010) Zeynep Baharoglu et al.   MOLECULAR MICROBIOLOGY

Allosteric control of Escherichia coli rRNA promoter complexes by DksA

(2009) S. T. Rutherford et al.   GENES & DEVELOPMENT

Advances in bacterial promoter recognition and its control by factors that do not bind DNA

(2008) Shanil P. Haugen et al.   NATURE REVIEWS MICROBIOLOGY