Dual-colour imaging of RNAs using quencher- and fluorophore-binding aptamers

RNA Mango Aptamer-Fluorophore: A Bright, High-Affinity Complex for RNA Labeling and Tracking

(2014) Elena V. Dolgosheina et al.   ACS Chemical Biology

Live-Cell Imaging of Endogenous mRNAs with a Small Molecule

(2014) Shin-ichi Sato et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Live-cell imaging of Pol II promoter activity to monitor gene expression with RNA IMAGEtag reporters

(2014) Ilchung Shin et al.   NUCLEIC ACIDS RESEARCH

Background free imaging of single mRNAs in live cells using split fluorescent proteins

(2014) Bin Wu et al.   Scientific Reports

Contact-Mediated Quenching for RNA Imaging in Bacteria with a Fluorophore-Binding Aptamer

(2013) Murat Sunbul et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

A superfolding Spinach2 reveals the dynamic nature of trinucleotide repeat–containing RNA

(2013) Rita L Strack et al.   NATURE METHODS

Using Spinach-based sensors for fluorescence imaging of intracellular metabolites and proteins in living bacteria

(2013) Rita L Strack et al.   Nature Protocols

Single-molecule analysis of gene expression using two-color RNA labeling in live yeast

(2012) Sami Hocine et al.   NATURE METHODS

Small-molecule fluorescent probes for specific RNA targets

(2011) Asako Murata et al.   CHEMICAL COMMUNICATIONS

Analysis of RNA localization and metabolism in single live bacterial cells: achievements and challenges

(2011) Natalia E. Broude   MOLECULAR MICROBIOLOGY

RNA Mimics of Green Fluorescent Protein

(2011) J. S. Paige et al.   SCIENCE

Combining SELEX Screening and Rational Design to Develop Light-Up Fluorophore−RNA Aptamer Pairs for RNA Tagging

(2010) Jungjoon Lee et al.   ACS Chemical Biology

Isolation and characterization of fluorescence-enhancing RNA tags

(2010) Anna Wiesmayr et al.   BIOORGANIC & MEDICINAL CHEMISTRY

Turn-on fluorescence switch involving aggregation and elimination processes for β-lactamase-tag

(2010) Kalyan K. Sadhu et al.   CHEMICAL COMMUNICATIONS

Spatial organization of the flow of genetic information in bacteria

(2010) Paula Montero Llopis et al.   NATURE

Selecting RNA aptamers for synthetic biology: investigating magnesium dependence and predicting binding affinity

(2010) James M. Carothers et al.   NUCLEIC ACIDS RESEARCH

Imaging intracellular RNA distribution and dynamics in living cells

(2009) Sanjay Tyagi   NATURE METHODS

IC50-to-Ki: a web-based tool for converting IC50 to Ki values for inhibitors of enzyme activity and ligand binding

(2009) R. Z. Cer et al.   NUCLEIC ACIDS RESEARCH

Transcription monitoring using fused RNA with a dye-binding light-up aptamer as a tag: a blue fluorescent RNA

(2008) Shinsuke Sando et al.   CHEMICAL COMMUNICATIONS

Synthesis of New Fluorogenic Cyanine Dyes and Incorporation into RNA Fluoromodules

(2008) Tudor P. Constantin et al.   ORGANIC LETTERS