Journal
JOURNAL OF COMPUTATIONAL CHEMISTRY
Volume 33, Issue 19, Pages 1632-1636Publisher
WILEY
DOI: 10.1002/jcc.22989
Keywords
molecular dynamics; trajectory analysis; molecular modeling; library; C plus
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Funding
- Ukrainian National Grid Technologies Program
- STCU [05525]
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An open-source Pteros library for molecular modeling and analysis of molecular dynamics trajectories for C++ programming language is introduced. Pteros provides a number of routine analysis operations ranging from reading and writing trajectory files and geometry transformations to structural alignment and computation of nonbonded interaction energies. The library features asynchronous trajectory reading and parallel execution of several analysis routines, which greatly simplifies development of computationally intensive trajectory analysis algorithms. Pteros programming interface is very simple and intuitive while the source code is well documented and easily extendible. Pteros is available for free under open-source Artistic License from . (c) 2012 Wiley Periodicals, Inc.
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