VoteDock: Consensus docking method for prediction of protein-ligand interactions

Convergence and combination of methods in protein–protein docking

(2009) Sandor Vajda et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Scoring Ensembles of Docked Protein:Ligand Interactions for Virtual Lead Optimization

(2009) Janet L. Paulsen et al.   Journal of Chemical Information and Modeling

Comparative Assessment of Scoring Functions on a Diverse Test Set

(2009) Tiejun Cheng et al.   Journal of Chemical Information and Modeling

SeleX-CS: A New Consensus Scoring Algorithm for Hit Discovery and Lead Optimization

(2009) Shay Bar-Haim et al.   Journal of Chemical Information and Modeling

Empirical Scoring Functions for Advanced Protein−Ligand Docking with PLANTS

(2009) Oliver Korb et al.   Journal of Chemical Information and Modeling

Scoring confidence index: statistical evaluation of ligand binding mode predictions

(2009) Maria I. Zavodszky et al.   JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN

Structural Artifacts in Protein−Ligand X-ray Structures: Implications for the Development of Docking Scoring Functions

(2009) Chresten R. Søndergaard et al.   JOURNAL OF MEDICINAL CHEMISTRY

Hybrid Scoring and Classification Approaches to Predict Human Pregnane X Receptor Activators

(2009) Sandhya Kortagere et al.   PHARMACEUTICAL RESEARCH

Evaluation of ligand-binding affinity using polynomial empirical scoring functions

(2008) Walter Filgueira de Azevedo et al.   BIOORGANIC & MEDICINAL CHEMISTRY

Evaluation of Molecular Docking Using Polynomial Empirical Scoring Functions

(2008) Raquel Dias et al.   CURRENT DRUG TARGETS

Recent Progress and Future Directions in Protein-Protein Docking

(2008) David Ritchie   CURRENT PROTEIN & PEPTIDE SCIENCE

Structure-Based Virtual Screening with Supervised Consensus Scoring: Evaluation of Pose Prediction and Enrichment Factors

(2008) Reiji Teramoto et al.   Journal of Chemical Information and Modeling

Consensus Scoring with Feature Selection for Structure-Based Virtual Screening

(2008) Reiji Teramoto et al.   Journal of Chemical Information and Modeling

Bootstrap-Based Consensus Scoring Method for Protein–Ligand Docking

(2008) Hiroaki Fukunishi et al.   Journal of Chemical Information and Modeling

MedusaScore: An Accurate Force Field-Based Scoring Function for Virtual Drug Screening

(2008) Shuangye Yin et al.   Journal of Chemical Information and Modeling

Molecular Docking of Intercalators and Groove-Binders to Nucleic Acids Using Autodock and Surflex

(2008) Patrick A. Holt et al.   Journal of Chemical Information and Modeling

Principles of flexible protein-protein docking

(2008) Nelly Andrusier et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Molecule-pharmacophore superpositioning and pattern matching in computational drug design

(2007) G WOLBER   DRUG DISCOVERY TODAY