Rapid Whole-Genome Sequencing for Detection and Characterization of Microorganisms Directly from Clinical Samples
Published 2013 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Rapid Whole-Genome Sequencing for Detection and Characterization of Microorganisms Directly from Clinical Samples
Authors
Keywords
-
Journal
JOURNAL OF CLINICAL MICROBIOLOGY
Volume 52, Issue 1, Pages 139-146
Publisher
American Society for Microbiology
Online
2013-10-31
DOI
10.1128/jcm.02452-13
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Sequences of multiple bacterial genomes and a Chlamydia trachomatis genotype from direct sequencing of DNA derived from a vaginal swab diagnostic specimen
- (2013) P. Andersson et al. CLINICAL MICROBIOLOGY AND INFECTION
- Whole-genome sequences of Chlamydia trachomatis directly from clinical samples without culture
- (2013) H. M. B. Seth-Smith et al. GENOME RESEARCH
- A Culture-Independent Sequence-Based Metagenomics Approach to the Investigation of an Outbreak of Shiga-Toxigenic Escherichia coli O104:H4
- (2013) Nicholas J. Loman et al. JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION
- snpTree - a web-server to identify and construct SNP trees from whole genome sequence data
- (2012) Pimlapas Leekitcharoenphon et al. BMC GENOMICS
- Genotyping using whole-genome sequencing is a realistic alternative to surveillance based on phenotypic antimicrobial susceptibility testing
- (2012) E. Zankari et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Identification of acquired antimicrobial resistance genes
- (2012) E. Zankari et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Rapid Whole-Genome Sequencing for Investigation of a Suspected Tuberculosis Outbreak
- (2012) M. E. Torok et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Multilocus Sequence Typing of Total-Genome-Sequenced Bacteria
- (2012) M. V. Larsen et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study
- (2012) Timothy M Walker et al. LANCET INFECTIOUS DISEASES
- Whole-genome sequencing for analysis of an outbreak of meticillin-resistant Staphylococcus aureus: a descriptive study
- (2012) Simon R Harris et al. LANCET INFECTIOUS DISEASES
- Transforming clinical microbiology with bacterial genome sequencing
- (2012) Xavier Didelot et al. NATURE REVIEWS GENETICS
- Rapid Whole-Genome Sequencing for Investigation of a Neonatal MRSA Outbreak
- (2012) Claudio U. Köser et al. NEW ENGLAND JOURNAL OF MEDICINE
- Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease
- (2012) B. C. Young et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A pilot study of rapid benchtop sequencing ofStaphylococcus aureusandClostridium difficilefor outbreak detection and surveillance
- (2012) David W Eyre et al. BMJ Open
- Routine Use of Microbial Whole Genome Sequencing in Diagnostic and Public Health Microbiology
- (2012) Claudio U. Köser et al. PLoS Pathogens
- Assessing diversity of the female urine microbiota by high throughput sequencing of 16S rDNA amplicons
- (2011) Huma Siddiqui et al. BMC MICROBIOLOGY
- Prospective Genomic Characterization of the German Enterohemorrhagic Escherichia coli O104:H4 Outbreak by Rapid Next Generation Sequencing Technology
- (2011) Alexander Mellmann et al. PLoS One
- Population Genetics of Vibrio cholerae from Nepal in 2010: Evidence on the Origin of the Haitian Outbreak
- (2011) R. S. Hendriksen et al. mBio
- Three-Hour Molecular Detection of Campylobacter, Salmonella, Yersinia, and Shigella Species in Feces with Accuracy as High as That of Culture
- (2010) S. A. Cunningham et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Hidden pathogens uncovered: metagenomic analysis of urinary tract infections
- (2008) C. Imirzalioglu et al. ANDROLOGIA
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started