A test of systematic coarse-graining of molecular dynamics simulations: Transport properties

New Approaches for Dynamic Simulations of Implicit Solvent Coarse-Grained Models of Lipid Bilayer Membranes

(2013) Paul J. Atzberger   BIOPHYSICAL JOURNAL

Microscopic derivation of particle-based coarse-grained dynamics

(2013) Sergei Izvekov   JOURNAL OF CHEMICAL PHYSICS

A test of systematic coarse-graining of molecular dynamics simulations: Thermodynamic properties

(2012) Chia-Chun Fu et al.   JOURNAL OF CHEMICAL PHYSICS

Limitations and recommendations for the calculation of shear viscosity using reverse nonequilibrium molecular dynamics

(2010) Craig M. Tenney et al.   JOURNAL OF CHEMICAL PHYSICS

The multiscale coarse-graining method. V. Isothermal-isobaric ensemble

(2010) Avisek Das et al.   JOURNAL OF CHEMICAL PHYSICS

Direct construction of mesoscopic models from microscopic simulations

(2010) Huan Lei et al.   PHYSICAL REVIEW E

On the microscopic foundation of dissipative particle dynamics

(2009) A. Eriksson et al.   EPL

Mori–Zwanzig formalism as a practical computational tool

(2009) Carmen Hijón et al.   FARADAY DISCUSSIONS

A method for estimating the interactions in dissipative particle dynamics from particle trajectories

(2009) Anders Eriksson et al.   JOURNAL OF PHYSICS-CONDENSED MATTER

Effective control of the transport coefficients of a coarse-grained liquid and polymer models using the dissipative particle dynamics and Lowe–Andersen equations of motion

(2009) Hu-Jun Qian et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Multiscale modeling of emergent materials: biological and soft matter

(2009) Teemu Murtola et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Effective thermostat induced by coarse graining of simple point charge water

(2008) Anders Eriksson et al.   JOURNAL OF CHEMICAL PHYSICS

Hydrodynamic interactions in dissipative particle dynamics

(2008) Zhigang Li et al.   PHYSICS OF FLUIDS

Transport properties controlled by a thermostat: An extended dissipative particle dynamics thermostat

(2007) Christoph Junghans et al.   Soft Matter