Non-stationary forward flux sampling

Rare switching events in non-stationary systems

(2012) Nils B. Becker et al.   JOURNAL OF CHEMICAL PHYSICS

Flow-Dependent Unfolding and Refolding of an RNA by Nonequilibrium Umbrella Sampling

(2011) Alex Dickson et al.   Journal of Chemical Theory and Computation

A Review of Monte Carlo Simulations of Polymers with PERM

(2011) Hsiao-Ping Hsu et al.   JOURNAL OF STATISTICAL PHYSICS

Sampling rare events in nonequilibrium and nonstationary systems

(2010) Joshua T. Berryman et al.   JOURNAL OF CHEMICAL PHYSICS

Steady-state simulations using weighted ensemble path sampling

(2010) Divesh Bhatt et al.   JOURNAL OF CHEMICAL PHYSICS

The “weighted ensemble” path sampling method is statistically exact for a broad class of stochastic processes and binning procedures

(2010) Bin W. Zhang et al.   JOURNAL OF CHEMICAL PHYSICS

Nonequilibrium umbrella sampling in spaces of many order parameters

(2009) Alex Dickson et al.   JOURNAL OF CHEMICAL PHYSICS

Exact rate calculations by trajectory parallelization and tilting

(2009) Eric Vanden-Eijnden et al.   JOURNAL OF CHEMICAL PHYSICS

Forward flux sampling for rare event simulations

(2009) Rosalind J Allen et al.   JOURNAL OF PHYSICS-CONDENSED MATTER

The switching dynamics of the bacterial flagellar motor

(2009) Siebe B van Albada et al.   Molecular Systems Biology

Optimizing the sampling and staging for simulations of rare events via forward flux sampling schemes

(2008) Ernesto E. Borrero et al.   JOURNAL OF CHEMICAL PHYSICS

Pathways of Maximum Likelihood for Rare Events in Nonequilibrium Systems: Application to Nucleation in the Presence of Shear

(2008) Matthias Heymann et al.   PHYSICAL REVIEW LETTERS