Coarse-grained Brownian dynamics simulations of protein translocation through nanopores

Polymer translocation in solid-state nanopores: Dependence of scaling behavior on pore dimensions and applied voltage

(2012) Christopher M. Edmonds et al.   JOURNAL OF CHEMICAL PHYSICS

Dynamics of polymer translocation into a circular nanocontainer through a nanopore

(2012) Kehong Zhang et al.   JOURNAL OF CHEMICAL PHYSICS

Driven polymer translocation through a cylindrical nanochannel: interplay between the channel length and the chain length

(2012) Huaisong Yong et al.   Soft Matter

Free-energy barrier for electric-field-driven polymer entry into nanoscale channels

(2011) Narges Nikoofard et al.   PHYSICAL REVIEW E

Many-particle Brownian and Langevin Dynamics Simulations with the Brownmove package

(2011) Tihamér Geyer   BMC Biophysics

Brownian Dynamics Simulation of Nucleocytoplasmic Transport: A Coarse-Grained Model for the Functional State of the Nuclear Pore Complex

(2011) Ruhollah Moussavi-Baygi et al.   PLoS Computational Biology

Protein translocation across the ER membrane

(2010) Richard Zimmermann et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Polymer translocation through nanopores: Parking lot problems, scaling laws and their breakdown

(2010) R. Metzler et al.   European Physical Journal-Special Topics

Electrically Facilitated Translocations of Proteins through Silicon Nitride Nanopores: Conjoint and Competitive Action of Diffusion, Electrophoresis, and Electroosmosis

(2010) Matthias Firnkes et al.   NANO LETTERS

Molecular simulation of protein dynamics in nanopores. II. Diffusion

(2009) Leili Javidpour et al.   JOURNAL OF CHEMICAL PHYSICS

Coarse grained simulations of a small peptide: Effects of finite damping and hydrodynamic interactions

(2009) Uwe Winter et al.   JOURNAL OF CHEMICAL PHYSICS

Striking Effects of Hydrodynamic Interactions on the Simulated Diffusion and Folding of Proteins

(2009) Tamara Frembgen-Kesner et al.   Journal of Chemical Theory and Computation

Nanoporous membranes for medical and biological applications

(2009) Shashishekar P. Adiga et al.   Wiley Interdisciplinary Reviews-Nanomedicine and Nanobiotechnology

Molecular simulation of protein dynamics in nanopores. I. Stability and folding

(2008) Leili Javidpour et al.   JOURNAL OF CHEMICAL PHYSICS

Polymer translocation through a cylindrical channel

(2008) Chiu Tai Andrew Wong et al.   JOURNAL OF CHEMICAL PHYSICS