The diffusive finite state projection algorithm for efficient simulation of the stochastic reaction-diffusion master equation

The multinomial simulation algorithm for discrete stochastic simulation of reaction-diffusion systems

(2009) Sotiria Lampoudi et al.   JOURNAL OF CHEMICAL PHYSICS

The Reaction-Diffusion Master Equation as an Asymptotic Approximation of Diffusion to a Small Target

(2009) Samuel A. Isaacson   SIAM JOURNAL ON APPLIED MATHEMATICS

Simulation of Stochastic Reaction-Diffusion Processes on Unstructured Meshes

(2009) Stefan Engblom et al.   SIAM JOURNAL ON SCIENTIFIC COMPUTING

A constant-time kinetic Monte Carlo algorithm for simulation of large biochemical reaction networks

(2008) Alexander Slepoy et al.   JOURNAL OF CHEMICAL PHYSICS

A hybrid multiscale kinetic Monte Carlo method for simulation of copper electrodeposition

(2008) Zheming Zheng et al.   JOURNAL OF COMPUTATIONAL PHYSICS

Modeling Robustness Tradeoffs in Yeast Cell Polarization Induced by Spatial Gradients

(2008) Ching-Shan Chou et al.   PLoS One