Review
Cell Biology
Yue Tian, Guangchan Jing, Mengren Zhang
Summary: This review summarizes the preclinical and clinical research on the potential application of insulin-degrading enzyme (IDE) for improving cognitive impairment. It also provides an overview of the main pathways that can be targeted to mitigate the progression of Alzheimer's disease and cognitive impairment caused by diabetes.
AGEING RESEARCH REVIEWS
(2023)
Review
Biochemistry & Molecular Biology
Joanna Zukowska, Stephen J. Moss, Vasanta Subramanian, K. Ravi Acharya
Summary: The accumulation of A beta peptide is linked to the development of Alzheimer's disease, and ADEs play a crucial role in its clearance. Upregulation of ADEs provides a potential therapeutic target, with NEP, ECE-1, IDE, and ACE being identified as important enzymes.
Review
Microbiology
Feijie Li, Milton Hearn, Louise E. Bennett
Summary: Alzheimer's disease is the most common cause of dementia, and recent advances suggest that pathogenic microbial infection may play a role in its pathogenesis. Microbes can drive AD pathology through direct or indirect pathways, indicating that anti-microbial therapies could be effective in managing the disease.
CRITICAL REVIEWS IN MICROBIOLOGY
(2021)
Review
Biochemistry & Molecular Biology
Chu-Qiao Liang, Yan-Mei Li
Summary: The review highlights recent progress in peptide-based inhibitors, including amyloid sequence-derived inhibitors, designed peptides, and peptide mimics, towards pathological amyloid proteins and deposition. These peptides exhibit advanced inhibitory activities against fibrous aggregation as well as enhanced druggability, based on increased understanding of peptide design and precise amyloid structures.
CURRENT OPINION IN CHEMICAL BIOLOGY
(2021)
Article
Biochemistry & Molecular Biology
Rita Tosto, Graziella Vecchio, Francesco Bellia
Summary: Neurodegenerative diseases affect millions of people worldwide. A new biotin-GHK conjugate (BioGHK) that coordinates copper(II) is found to treat and prevent adverse biochemical reactions associated with these diseases, such as Alzheimer's disease.
Article
Biochemistry & Molecular Biology
Karina Abramov-Harpaz, Yifat Miller
Summary: This study provides insights into the molecular mechanisms of insulin degrading enzyme (IDE) activity on encapsulating different forms of amyloid beta (A beta) dimers. IDE acts as a 'dead-end' chaperone protein for fibril-like A beta dimers and successfully impedes the contacts between monomers. However, IDE's inhibitory activity on random coil/alpha-helix dimers depends on the stability of the dimer.
Review
Cell Biology
Chantal Vidal, Li Zhang
Summary: Alzheimer's disease is a neurodegenerative disorder characterized by amyloid beta plaques, neurofibrillary tangles, and neuronal loss. Despite decades of research, there is no effective treatment for AD. Recent studies suggest that dysfunctional heme metabolism may play a crucial role in the development of AD.
Article
Neurosciences
Lisa Gallwitz, Lina Schmidt, Andre R. A. Marques, Andreas Tholey, Liam Cassidy, Irem Ulku, Gerhard Multhaup, Alessandro Di Spiezio, Paul Saftig
Summary: CTSD has proteolytic cleavage activity on human Aβ1-42, but does not play a prominent role in APP processing and Aβ degradation.
NEUROBIOLOGY OF DISEASE
(2022)
Article
Biochemistry & Molecular Biology
Lucia Gallego-Villarejo, Cecilia Wallin, Sylwia Krol, Jennifer Enrich-Bengoa, Albert Suades, Marcel Aguilella-Arzo, Maria Jose Gomara, Isabel Haro, Sebastian Warmlander, Francisco J. Munoz, Astrid Graslund, Alex Peralvarez-Marin
Summary: The interaction between dynorphins and AO40 reduces the aggregation and slows down the aggregation kinetics of AO40. This cross-interaction provides insights into the mechanism of amyloid pathophysiology and may lead to new therapy possibilities.
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL
(2022)
Article
Biochemistry & Molecular Biology
Bikash R. Sahoo, Pritam Kumar Panda, Wenguang Liang, Wei-Jen Tang, Rajeev Ahuja, Ayyalusamy Ramamoorthy
Summary: The study demonstrates that cf-E111Q-IDE degrades Aβ(1-40) through a non-chaperone mechanism with reduced impact on aggregation kinetics. Zinc binding to Aβ(1-40) inactivates cf-E111Q-IDE's catalytic function, while zinc removal restores its function. These findings highlight the catalytic role of cf-E111Q-IDE in Aβ degradation and suggest the development of zinc chelators as a therapeutic strategy to modulate IDE's function.
JOURNAL OF MOLECULAR BIOLOGY
(2021)
Review
Biochemistry & Molecular Biology
Anming Xu, Xiaoxiao Zhang, Shilei Wu, Ning Xu, Yan Huang, Xin Yan, Jie Zhou, Zhongli Cui, Weiliang Dong
Summary: Treatment of environmental pollution using microorganisms and their enzymes is an innovative and efficient method to mitigate various pollutants. Further research and understanding of the catalytic mechanisms of these degrading enzymes is necessary to enhance degradation efficiency.
Review
Biochemistry & Molecular Biology
Masahiro Kawahara, Midori Kato-Negishi, Ken-ichiro Tanaka
Summary: Prion diseases are progressive and transmissive neurodegenerative diseases, where the conversion of normal cellular prion protein (PrP(C)) into abnormal pathogenic prion protein (PrPSc) is critical. PrP(C) has the ability to bind to various neurometals and plays essential roles in maintaining the homeostasis of these neurometals at the synapse, which are critical determinants of the conformational change and toxicity of PrP(C).
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Article
Immunology
Zhiyu Wang, Donald F. Weaver
Summary: Alzheimer's disease is a neurodegenerative disorder characterized by the progressive deterioration of multiple cognitive functions. Microglial cells play a crucial role in the pathogenesis of Alzheimer's disease through the recognition and response to misfolded proteins like beta-amyloid and tau. These proteins contribute to neuroinflammation and neurotoxicity, while microglia's primary function is to maintain brain homeostasis and synaptic integrity. However, prolonged activation of microglia can be harmful. This review discusses the role of microglia in Alzheimer's disease pathogenesis and explores potential drug candidates targeting microglial receptors.
INTERNATIONAL IMMUNOPHARMACOLOGY
(2022)
Article
Biochemistry & Molecular Biology
Xueying Zhong, Rakesh Kumar, Yu Wang, Henrik Biverstal, Caroline Ingeborg Jegerschoeld, Philip J. B. Koeck, Jan Johansson, Axel Abelein, Gefei Chen
Summary: This study demonstrates that the Bri2 BRICHOS protein efficiently inhibits the aggregation of the highly aggregation-prone variant A beta(arc), resulting in delayed fibril formation. The protein interferes with A beta aggregation by affecting secondary nucleation and fibril end elongation.
ACS CHEMICAL BIOLOGY
(2022)
Article
Food Science & Technology
Che-Wei Lin, Pei-Ying Lin, Ya-Wen Hsu, Tzu-Ming Pan, Chun-Lin Lee
Summary: Monascin (MS) and ankaflavin (AK), produced by Monascus purpureus, have the potential to improve memory deficiency in Alzheimer's disease rat models. However, the mechanisms through which they exert their effects are still unclear. Through in vitro and in vivo studies, we investigated the effects and mechanisms of MS and AK on preventing A beta 40-induced oxidative stress and inflammatory response. Our results showed that MS and AK enhanced cell viability and repressed the expression of oxidative and inflammatory factors, leading to improved memory and reduced neurotoxicity.
JOURNAL OF FUNCTIONAL FOODS
(2023)
Review
Biochemistry & Molecular Biology
Carlos M. Gonzalez-Casimiro, Beatriz Merino, Elena Casanueva-Alvarez, Tamara Postigo-Casado, Patricia Camara-Torres, Cristina M. Fernandez-Diaz, Malcolm A. Leissring, Irene Cozar-Castellano, German Perdomo
Summary: IDE is not only involved in insulin clearance, but also plays important roles in insulin secretion and sensitivity.
Article
Chemistry, Medicinal
Rebecca N. Adamek, Caitlin N. Suire, Ryjul W. Stokes, Monica K. Brizuela, Seth M. Cohen, Malcolm A. Leissring
Summary: IDE, a mononuclear Zn2+-dependent metalloenzyme, plays a crucial role in the degradation of insulin and various other peptide hormones. Research on IDE inhibitors is important for understanding its role in diseases such as diabetes and Alzheimer's. Several potential IDE inhibitors have been discovered, showing promise as pharmacological tools for future studies.
Review
Biochemistry & Molecular Biology
Malcolm A. Leissring, Carlos M. Gonzalez-Casimiro, Beatriz Merino, Caitlin N. Suire, German Perdomo
Summary: Hepatic insulin clearance and the activity of insulin-degrading enzyme might be involved in the pathogenesis of type 2 diabetes mellitus, and the development of IDE inhibitors as therapeutics for diabetic patients has garnered attention.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Article
Biotechnology & Applied Microbiology
Ignacio Smith, Gregorio Juan Mc Callum, Adriana Victoria Sabljic, Juan Ignacio Marfia, Silvina Sonia Bombicino, Aldana Trabucchi, Ruben Francisco Iacono, Joaquin Manuel Birenbaum, Susana Claudia Vazquez, Juan Mauricio Minoia, Osvaldo Cascone, Maria Gabriela Lopez, Oscar Taboga, Alexandra Marisa Targovnik, Federico Javier Wolman, Matias Fingermann, Leonardo Gabriel Alonso, Silvina Noemi Valdez, Maria Victoria Miranda
Summary: The study successfully expressed the recombinant S protein of SARS-CoV-2 in the important agricultural pest Rachiplusia nu, establishing an efficient and cost-effective platform for large-scale production of the S protein. This method was used to develop an ELISA test with high sensitivity (96.2%) and specificity (98.8%) for anti-SARS-CoV-2 antibodies detection.
BIOTECHNOLOGY AND BIOENGINEERING
(2021)
Article
Biochemistry & Molecular Biology
Ramiro Lorenzo, Lucas A. Defelipe, Lucio Aliperti, Stephan Niebling, Tania F. Custodio, Christian Loew, Jennifer J. Schwarz, Kim Remans, Patricio O. Craig, Lisandro H. Otero, Sebastian Klinke, Maria Garcia-Alai, Ignacio E. Sanchez, Leonardo G. Alonso
Summary: Asparagine deamidation of the spike protein in SARS-CoV-2 can modulate viral infectivity and host immune response. Deamidation of the spike receptor-binding motif decreases the binding affinity to the human receptor, but may have positive implications for viral fitness. This study highlights the potential mechanism for molecular aging of the spike protein and its impact on virus infectivity and vaccine development.
JOURNAL OF BIOLOGICAL CHEMISTRY
(2021)
Article
Cell Biology
Malcolm A. Leissring
Summary: There are still many important unresolved questions in the field of IDE, such as how IDE interacts with extracellular substrates, its localization and functional roles within the cell, and how it avoids getting clogged and losing activity. The author provides personal insights and experimental strategies to address these challenges, aiming to advance the research on the physiology and pathophysiology of IDE with the development of new technologies and specific reagents.
Article
Cell Biology
Carlos M. Gonzalez-Casimiro, Patricia Camara-Torres, Beatriz Merino, Sergio Diez-Hermano, Tamara Postigo-Casado, Malcolm A. Leissring, Irene Cozar-Castellano, German Perdomo
Summary: This study investigates the regulation of insulin-degrading enzyme (IDE) in the liver, skeletal muscle, and kidneys of mice under fasting and refeeding conditions, revealing a direct correlation between circulating lactate concentrations and IDE activity and protein levels. The study also suggests that IDE regulation in liver and muscle tissues is more complex than previously expected, with fasting/refeeding having little influence on renal IDE regulation.
Article
Endocrinology & Metabolism
Beatriz Merino, Elena Casanueva-Alvarez, Ivan Quesada, Carlos M. Gonzalez-Casimiro, Cristina M. Fernandez-Diaz, Tamara Postigo-Casado, Malcolm A. Leissring, Klaus H. Kaestner, German Perdomo, Irene Cozar-Castellano
Summary: This study found that loss of IDE function in alpha cells leads to impaired alpha cell function, resulting in abnormal glucagon secretion and hyperglucagonaemia. The study also revealed that IDE deficiency in alpha cells impairs the ability to suppress glucagon release in the presence of high glucose or insulin, and contributes to alpha-synuclein aggregation which may affect glucagon secretion via cytoskeletal dysfunction.
Article
Biochemical Research Methods
Juan R. Lorenzo, Cesar O. Leonetti, Leonardo G. Alonso, Ignacio E. Sanchez
Summary: Researchers have developed a new algorithm for predicting spontaneous protein deamidation, which is faster and similarly accurate compared to current algorithms. The algorithm takes into account sequence propensities and structural protection to predict the half-life of intact form for each protein. The analysis shows that different taxa exhibit different deamidation dynamics.
Article
Biochemistry & Molecular Biology
Gabriel Vallejos-Baccelliere, Sergio B. Kaufman, Rodolfo M. Gonzalez-Lebrero, Victor Castro-Fernandez, Victoria Guixe
Summary: Methanogenic archaea have potential applications in biotechnology, and this study sheds light on the regulatory mechanisms of their sugar metabolism. The activation of enzymatic activities by adenosine monophosphate (AMP) and the inhibition caused by sugar binding were elucidated, providing important insights into the metabolism of these microorganisms.
Article
Biochemistry & Molecular Biology
Natalia S. Adler, Leila A. Cababie, Carolina Sarto, Claudio N. Cavasotto, Leopoldo G. Gebhard, Dario A. Estrin, Andrea Gamarnik, Mehrnoosh Arrar, Sergio B. Kaufman
Summary: This article presents a detailed mechanistic analysis of the product release stage in the catalytic cycle of the dengue virus NS3h. The study supports a model in which ATP hydrolysis proceeds through an ordered sequential mechanism involving the NS3h-Pi-ADP ternary complex intermediate. The results indicate that a novel open-loop conformation plays an important role in the product release stage of NS3h.
NUCLEIC ACIDS RESEARCH
(2022)
Article
Microbiology
Julian Tarsitano, Lila Y. Ramis, Leonardo G. Alonso, Daniela M. Russo, Angeles Zorreguieta
Summary: The research demonstrates that RapD is a biofilm matrix-associated multimeric protein that influences the properties of the main structural component EPS of Rhizobium leguminosarum biofilm.
FRONTIERS IN MICROBIOLOGY
(2022)
Article
Biochemistry & Molecular Biology
Heather M. M. Terron, Derek S. S. Maranan, Luke A. A. Burgard, Frank M. M. LaFerla, Shelley Lane, Malcolm A. A. Leissring
Summary: The study presents a new TRE-Lox system that can achieve downregulation or genetic deletion of a target gene. The system is highly sensitive to Dox and allows for rapid and reversible downregulation of the target gene. It also enables complete deletion of the target gene through Cre recombinase. This novel system will facilitate the study of CatD in various diseases and can be applicable to other target genes requiring more complete disruption.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Biochemistry & Molecular Biology
Fernando Amrein, Carolina Sarto, Leila A. Cababie, F. Luis Gonzalez Flecha, Sergio B. Kaufman, Mehrnoosh Arrar
Summary: In this study, atomistic models and molecular dynamics simulations were used to investigate the RNA binding affinity of NS3h and its modulation by ATP. The results showed that the binding affinity between NS3h and ssRNA is enhanced with increased ssRNA lengths, and the modulation by bound ATP is also increased. Further analysis revealed that the binding of ATP leads to a shift from a tightly bound to a weakly bound state, which persists during different stages of the catalytic cycle. This research provides important insights into the NS3h-RNA interaction and its regulation during the catalytic cycle.
NUCLEIC ACIDS RESEARCH
(2023)
Correction
Endocrinology & Metabolism
Beatriz Merino, Elena Casanueva-Alvarez, Ivan Quesada, Carlos M. Gonzalez-Casimiro, Cristina M. Fernandez-Diaz, Tamara Postigo-Casado, Malcolm A. Leissring, Klaus H. Kaestner, German Perdomo, Irene Cozar-Castellano