Ancient proteins resolve the evolutionary history of Darwin’s South American ungulates

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Evolutionary Origins of C-Terminal (GPP)n 3-Hydroxyproline Formation in Vertebrate Tendon Collagen

(2014) David M. Hudson et al.   PLoS One

Splendid and Seldom Isolated: The Paleobiogeography of Patagonia

(2013) Peter Wilf et al.   Annual Review of Earth and Planetary Sciences

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse

(2013) Ludovic Orlando et al.   NATURE

A Molecular Phylogeny of Plesiorycteropus Reassigns the Extinct Mammalian Order ‘Bibymalagasia’

(2013) Michael Buckley   PLoS One

The Placental Mammal Ancestor and the Post-K-Pg Radiation of Placentals

(2013) M. A. O'Leary et al.   SCIENCE

Length and GC-biases during sequencing library amplification: A comparison of various polymerase-buffer systems with ancient and modern DNA sequencing libraries

(2012) Jesse Dabney et al.   BIOTECHNIQUES

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

(2012) R. Lanfear et al.   MOLECULAR BIOLOGY AND EVOLUTION

Population history of the Hispaniolan hutiaPlagiodontia aedium(Rodentia: Capromyidae): testing the model of ancient differentiation on a geotectonically complex Caribbean island

(2012) SELINA BRACE et al.   MOLECULAR ECOLOGY

Resolving conflict in eutherian mammal phylogeny using phylogenomics and the multispecies coalescent model

(2012) S. Song et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phylogenomic datasets provide both precision and accuracy in estimating the timescale of placental mammal phylogeny

(2012) M. dos Reis et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The half-life of DNA in bone: measuring decay kinetics in 158 dated fossils

(2012) M. E. Allentoft et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Site-specific deamidation of glutamine: a new marker of bone collagen deterioration

(2012) Nienke L. van Doorn et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Astronomical calibration of the Maastrichtian (Late Cretaceous)

(2011) Dorothée Husson et al.   EARTH AND PLANETARY SCIENCE LETTERS

No evidence for an afrotherian-like delayed dental eruption in South American notoungulates

(2011) Guillaume Billet et al.   NATURWISSENSCHAFTEN

Insights on the Evolution of Prolyl 3-Hydroxylation Sites from Comparative Analysis of Chicken and Xenopus Fibrillar Collagens

(2011) David M. Hudson et al.   PLoS One

Impacts of the Cretaceous Terrestrial Revolution and KPg Extinction on Mammal Diversification

(2011) R. W. Meredith et al.   SCIENCE

Climate modification by future ice sheet changes and consequences for ice sheet mass balance

(2009) M. Vizcaíno et al.   CLIMATE DYNAMICS

Species identification by analysis of bone collagen using matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry

(2009) Michael Buckley et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Dental eruption in afrotherian mammals

(2008) Robert J Asher et al.   BMC BIOLOGY

Comment on "Protein Sequences from Mastodon and Tyrannosaurus rex Revealed by Mass Spectrometry"

(2008) M. Buckley et al.   SCIENCE