‘Candidatus Competibacter’-lineage genomes retrieved from metagenomes reveal functional metabolic diversity

Metabolic model for the filamentous ‘Candidatus Microthrix parvicella’ based on genomic and metagenomic analyses

(2013) Simon Jon McIlroy et al.   ISME Journal

Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes

(2013) Mads Albertsen et al.   NATURE BIOTECHNOLOGY

Deciphering the Genome of Polyphosphate Accumulating Actinobacterium Microlunatus phosphovorus

(2012) A. Kawakoshi et al.   DNA RESEARCH

A metabolic model for members of the genus Tetrasphaera involved in enhanced biological phosphorus removal

(2012) Rikke Kristiansen et al.   ISME Journal

Fermentation, Hydrogen, and Sulfur Metabolism in Multiple Uncultivated Bacterial Phyla

(2012) K. C. Wrighton et al.   SCIENCE

Population dynamics of bacteria involved in enhanced biological phosphorus removal in Danish wastewater treatment plants

(2012) Artur Tomasz Mielczarek et al.   WATER RESEARCH

Microbial selection on enhanced biological phosphorus removal systems fed exclusively with glucose

(2012) Shamim A. Begum et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Selectively inducing the synthesis of a key structural exopolysaccharide in aerobic granules by enriching for Candidatus “Competibacter phosphatis”

(2011) Thomas William Seviour et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

High diversity and abundance of putative polyphosphate-accumulating Tetrasphaera-related bacteria in activated sludge systems

(2011) Hien Thi Thu Nguyen et al.   FEMS MICROBIOLOGY ECOLOGY

Integrative analysis of environmental sequences using MEGAN4

(2011) D. H. Huson et al.   GENOME RESEARCH

Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage

(2011) Chris L Dupont et al.   ISME Journal

Identification of a novel subgroup of uncultured gammaproteobacterial glycogen-accumulating organisms in enhanced biological phosphorus removal sludge

(2011) J. M. Kim et al.   MICROBIOLOGY-SGM

Unexpected and widespread connections between bacterial glycogen and trehalose metabolism

(2011) G. Chandra et al.   MICROBIOLOGY-SGM

Microbiology of ‘Candidatus Accumulibacter’ in activated sludge

(2011) Shaomei He et al.   Microbial Biotechnology

Population dynamics in a sequencing batch reactor fed with glucose and operated for enhanced biological phosphorus removal

(2010) Gülsüm Emel Zengin et al.   BIORESOURCE TECHNOLOGY

Metatranscriptomic array analysis of ‘Candidatus Accumulibacter phosphatis’-enriched enhanced biological phosphorus removal sludge

(2010) Shaomei He et al.   ENVIRONMENTAL MICROBIOLOGY

Structural Determination of a Key Exopolysaccharide in Mixed Culture Aerobic Sludge Granules Using NMR Spectroscopy

(2010) Thomas Seviour et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Plasticicumulans acidivorans gen. nov., sp. nov., a polyhydroxyalkanoate-accumulating gammaproteobacterium from a sequencing-batch bioreactor

(2010) Y. Jiang et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

FragGeneScan: predicting genes in short and error-prone reads

(2010) Mina Rho et al.   NUCLEIC ACIDS RESEARCH

Incorporating microbial ecology into the metabolic modelling of polyphosphate accumulating organisms and glycogen accumulating organisms

(2010) A. Oehmen et al.   WATER RESEARCH

A conceptual ecosystem model of microbial communities in enhanced biological phosphorus removal plants

(2010) Per Halkjær Nielsen et al.   WATER RESEARCH

Radiolabelled proteomics to determine differential functioning ofAccumulibacterduring the anaerobic and aerobic phases of a bioreactor operating for enhanced biological phosphorus removal

(2009) Margaret Wexler et al.   ENVIRONMENTAL MICROBIOLOGY

Phylogeny andin situidentification of a novel gammaproteobacterium in activated sludge

(2009) Sarah Schroeder et al.   FEMS MICROBIOLOGY LETTERS

(2S)-Methylsuccinyl-CoA dehydrogenase closes the ethylmalonyl-CoA pathway for acetyl-CoA assimilation

(2009) Tobias J. Erb et al.   MOLECULAR MICROBIOLOGY

Shifting the genomic gold standard for the prokaryotic species definition

(2009) Michael Richter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Temperature effects on glycogen accumulating organisms

(2009) Carlos M. Lopez-Vazquez et al.   WATER RESEARCH

Elucidating further phylogenetic diversity among theDefluviicoccus-related glycogen-accumulating organisms in activated sludge

(2009) Simon McIlroy et al.   Environmental Microbiology Reports

MicroScope: a platform for microbial genome annotation and comparative genomics

(2009) D. Vallenet et al.   Database-The Journal of Biological Databases and Curation

Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal

(2008) Paul Wilmes et al.   ISME Journal

The microbiology of phosphorus removal in activated sludge processes-the current state of play

(2008) Robert J. Seviour et al.   JOURNAL OF MICROBIOLOGY

The long and short of it – polyphosphate, PPK and bacterial survival

(2008) Michael R.W. Brown et al.   TRENDS IN BIOCHEMICAL SCIENCES

The denitrification capability of cluster 1Defluviicoccus vanus-related glycogen-accumulating organisms

(2007) Xiaolian Wang et al.   BIOTECHNOLOGY AND BIOENGINEERING