Significant and persistent impact of timber harvesting on soil microbial communities in Northern coniferous forests

Intensive forest biomass harvesting and biodiversity in Canada: A summary of relevant issues

(2014) Shannon Berch et al.   FORESTRY CHRONICLE

Effects of organic matter removal, soil compaction and vegetation control on 10th year biomass and foliar nutrition: LTSP continent-wide comparisons

(2012) Felix Ponder et al.   FOREST ECOLOGY AND MANAGEMENT

Heavy-Machinery Traffic Impacts Methane Emissions as Well as Methanogen Abundance and Community Structure in Oxic Forest Soils

(2011) Beat Frey et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

On the suitability of short reads of 16S rRNA for phylogeny-based analyses in environmental surveys

(2011) Patricio Jeraldo et al.   ENVIRONMENTAL MICROBIOLOGY

Active and total microbial communities in forest soil are largely different and highly stratified during decomposition

(2011) Petr Baldrian et al.   ISME Journal

Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy

(2011) I. Letunic et al.   NUCLEIC ACIDS RESEARCH

Pyrosequencing-Based Assessment of Bacterial Community Structure Along Different Management Types in German Forest and Grassland Soils

(2011) Heiko Nacke et al.   PLoS One

Soil moisture is the major factor influencing microbial community structure and enzyme activities across seven biogeoclimatic zones in western Canada

(2011) Beth F.T. Brockett et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil Habitat and Horizon Properties Impact Bacterial Diversity and Composition

(2011) Himaya M. Michel et al.   SOIL SCIENCE SOCIETY OF AMERICA JOURNAL

Horizon-Specific Bacterial Community Composition of German Grassland Soils, as Revealed by Pyrosequencing-Based Analysis of 16S rRNA Genes

(2010) C. Will et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Linking forest history and conservation efforts: Long-term impact of low-intensity timber harvest on forest structure and wood-inhabiting fungi in northern Sweden

(2010) Torbjörn Josefsson et al.   BIOLOGICAL CONSERVATION

A framework for classifying and quantifying the natural capital and ecosystem services of soils

(2010) Estelle Dominati et al.   ECOLOGICAL ECONOMICS

Biodiversity response to intensive biomass production from forest thinning in North American forests – A meta-analysis

(2010) Jake Verschuyl et al.   FOREST ECOLOGY AND MANAGEMENT

An open source software package for automated extraction of ITS1 and ITS2 from fungal ITS sequences for use in high-throughput community assays and molecular ecology

(2010) R. Henrik Nilsson et al.   Fungal Ecology

V-Xtractor: An open-source, high-throughput software tool to identify and extract hypervariable regions of small subunit (16S/18S) ribosomal RNA gene sequences

(2010) Martin Hartmann et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Microorganisms and climate change: terrestrial feedbacks and mitigation options

(2010) Brajesh K. Singh et al.   NATURE REVIEWS MICROBIOLOGY

454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases

(2010) Leho Tedersoo et al.   NEW PHYTOLOGIST

Improving indicator species analysis by combining groups of sites

(2010) Miquel De Cáceres et al.   OIKOS

Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins

(2010) P. J. Turnbaugh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Saving Forests to Save Biodiversity

(2010) Dennis Normile   SCIENCE

Spatial analysis reveals differences in soil microbial community interactions between adjacent coniferous forest and clearcut ecosystems

(2010) Daniel L. Mummey et al.   SOIL BIOLOGY & BIOCHEMISTRY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

qvality: non-parametric estimation of q-values and posterior error probabilities

(2009) Lukas Käll et al.   BIOINFORMATICS

Logging-residue extraction does not reduce the diversity of litter-layer saprotrophic fungi in three Swedish coniferous stands after 25 years

(2009) Johan Allmér et al.   CANADIAN JOURNAL OF FOREST RESEARCH

Associations between species and groups of sites: indices and statistical inference

(2009) Miquel De Cáceres et al.   ECOLOGY

Bacterial, archaeal and eukaryal community structures throughout soil horizons of harvested and naturally disturbed forest stands

(2009) Martin Hartmann et al.   ENVIRONMENTAL MICROBIOLOGY

The ITS region as a target for characterization of fungal communities using emerging sequencing technologies

(2009) Rolf Henrik Nilsson et al.   FEMS MICROBIOLOGY LETTERS

Whole tree harvesting can reduce second rotation forest productivity

(2009) J.D. Walmsley et al.   FOREST ECOLOGY AND MANAGEMENT

Forest carbon storage: ecology, management, and policy

(2009) Timothy J Fahey et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

Ectomycorrhizal lifestyle in fungi: global diversity, distribution, and evolution of phylogenetic lineages

(2009) Leho Tedersoo et al.   MYCORRHIZA

Accurate determination of microbial diversity from 454 pyrosequencing data

(2009) Christopher Quince et al.   NATURE METHODS

Bacterial communities associated with tuberculate ectomycorrhizae of Rhizopogon spp.

(2008) Annette M. Kretzer et al.   MYCORRHIZA

Resistance, resilience, and redundancy in microbial communities

(2008) S. D. Allison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Managing Forests for Climate Change Mitigation

(2008) J. G. Canadell et al.   SCIENCE

Reducing Greenhouse Gas Emissions from Deforestation and Forest Degradation: Global Land-Use Implications

(2008) L. Miles et al.   SCIENCE

Forests and Climate Change: Forcings, Feedbacks, and the Climate Benefits of Forests

(2008) G. B. Bonan   SCIENCE

Timber harvesting alters soil carbon mineralization and microbial community structure in coniferous forests

(2008) A. Chatterjee et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil organic matter in soil depth profiles: Distinct carbon preferences of microbial groups during carbon transformation

(2007) Christiane Kramer et al.   SOIL BIOLOGY & BIOCHEMISTRY