Transcriptomic differences between day and night inAcropora milleporaprovide new insights into metabolite exchange and light-enhanced calcification in corals

Photoreception and Signal Transduction in Corals: Proteomic and Behavioral Evidence for Cytoplasmic Calcium as a Mediator of Light Responsivity

(2016) J. Daniel Hilton et al.   BIOLOGICAL BULLETIN

Bicarbonate transporters in corals point towards a key step in the evolution of cnidarian calcification

(2015) Didier Zoccola et al.   Scientific Reports

Are Niemann-Pick type C proteins key players in cnidarian-dinoflagellate endosymbioses?

(2014) Vincent Dani et al.   MOLECULAR ECOLOGY

Immunolocalization of skeletal matrix proteins in tissue and mineral of the coral Stylophora pistillata

(2014) T. Mass et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Light enhanced calcification inStylophora pistillata: effects of glucose, glycerol and oxygen

(2014) Michael Holcomb et al.   PeerJ

Shrinkage estimation of dispersion in Negative Binomial models for RNA-seq experiments with small sample size

(2013) Danni Yu et al.   BIOINFORMATICS

High natural gene expression variation in the reef-building coral Acropora millepora: potential for acclimative and adaptive plasticity

(2013) Camila Granados-Cifuentes et al.   BMC GENOMICS

KEGG orthology-based annotation of the predicted proteome of Acropora digitifera: ZoophyteBase - an open access and searchable database of a coral genome

(2013) Walter C Dunlap et al.   BMC GENOMICS

Cloning and Characterization of Four Novel Coral Acid-Rich Proteins that Precipitate Carbonates In Vitro

(2013) Tali Mass et al.   CURRENT BIOLOGY

Impacts of ocean acidification on marine organisms: quantifying sensitivities and interaction with warming

(2013) Kristy J. Kroeker et al.   GLOBAL CHANGE BIOLOGY

Circadian Clocks in the Cnidaria: Environmental Entrainment, Molecular Regulation, and Organismal Outputs

(2013) Adam M. Reitzel et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Folate and thiamine transporters mediated by facilitative carriers (SLC19A1-3 and SLC46A1) and folate receptors

(2013) Rongbao Zhao et al.   MOLECULAR ASPECTS OF MEDICINE

The ABCs of membrane transporters in health and disease (SLC series): Introduction

(2013) Matthias A. Hediger et al.   MOLECULAR ASPECTS OF MEDICINE

The Skeletal Proteome of the Coral Acropora millepora: The Evolution of Calcification by Co-Option and Domain Shuffling

(2013) Paula Ramos-Silva et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genes Related to Ion-Transport and Energy Production Are Upregulated in Response to CO2-Driven pH Decrease in Corals: New Insights from Transcriptome Analysis

(2013) Jeremie Vidal-Dupiol et al.   PLoS One

Biomineralization toolkit: The importance of sample cleaning prior to the characterization of biomineral proteomes

(2013) P. Ramos-Silva et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Proteomic analysis of skeletal organic matrix from the stony coral Stylophora pistillata

(2013) J. L. Drake et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The major facilitator superfamily (MFS) revisited

(2012) Vamsee S. Reddy et al.   FEBS Journal

A genome-wide survey of photoreceptor and circadian genes in the coral, Acropora digitifera

(2012) Eiichi Shoguchi et al.   GENE

Coordinated modulation of cellular signaling through ligand-gated ion channels in Hydra vulgaris (Cnidaria, Hydrozoa)

(2012) Paola Pierobon   INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY

Structure, Function, and Modulation of GABAAReceptors

(2012) Erwin Sigel et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Evidence that glucose is the major transferred metabolite in dinoflagellate-cnidarian symbiosis

(2012) M. S. Burriesci et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Cell Biology of Cnidarian-Dinoflagellate Symbiosis

(2012) S. K. Davy et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

The transcriptomic response to thermal stress is immediate, transient and potentiated by ultraviolet radiation in the sea anemoneAnemonia viridis

(2012) A. MOYA et al.   MOLECULAR ECOLOGY

Whole Transcriptome Analysis of the CoralAcropora milleporaReveals Complex Responses to CO2-driven Acidification during the Initiation of Calcification

(2012) A. MOYA et al.   MOLECULAR ECOLOGY

Coral biomineralization: From the gene to the environment

(2011) Sylvie Tambutté et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Using the Acropora digitifera genome to understand coral responses to environmental change

(2011) Chuya Shinzato et al.   NATURE

Circadian Cycles of Gene Expression in the Coral, Acropora millepora

(2011) Aisling K. Brady et al.   PLoS One

Differential Gene Expression at Coral Settlement and Metamorphosis - A Subtractive Hybridization Study

(2011) David C. Hayward et al.   PLoS One

Complex Diel Cycles of Gene Expression in Coral-Algal Symbiosis

(2011) O. Levy et al.   SCIENCE

Adaptations to Endosymbiosis in a Cnidarian-Dinoflagellate Association: Differential Gene Expression and Specific Gene Duplications

(2011) Philippe Ganot et al.   PLoS Genetics

Transcriptome and proteome analysis of Pinctada margaritifera calcifying mantle and shell: focus on biomineralization

(2010) Caroline Joubert et al.   BMC GENOMICS

Calcification in bleached and unbleached Montastraea faveolata: evaluating the role of oxygen and glycerol

(2010) M. F. Colombo-Pallotta et al.   CORAL REEFS

The matrilins: Modulators of extracellular matrix assembly

(2010) Andreas R. Klatt et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

Effect of light and feeding on the fatty acid and sterol composition of zooxanthellae and host tissue isolated from the scleractinian coral Turbinaria reniformis

(2010) C. Treignier et al.   LIMNOLOGY AND OCEANOGRAPHY

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Differential expression of three galaxin-related genes during settlement and metamorphosis in the scleractinian coral Acropora millepora

(2009) Alejandro Reyes-Bermudez et al.   BMC EVOLUTIONARY BIOLOGY

Patterns of Gene Expression in a Scleractinian Coral Undergoing Natural Bleaching

(2009) Francois O. Seneca et al.   MARINE BIOTECHNOLOGY

Gene expression microarray analysis encompassing metamorphosis and the onset of calcification in the scleractinian coral Montastraea faveolata

(2009) Alejandro Reyes-Bermudez et al.   Marine Genomics

Microarray analysis reveals transcriptional plasticity in the reef building coralAcropora millepora

(2009) LINE K. BAY et al.   MOLECULAR ECOLOGY

Microarray analysis identifies candidate genes for key roles in coral development

(2008) Lauretta C Grasso et al.   BMC GENOMICS

Carbonic Anhydrase in the Scleractinian CoralStylophora pistillata

(2008) Aurélie Moya et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Cloning and Use of a Coral 36B4 Gene to Study the Differential Expression of Coral Genes Between Light and Dark Conditions

(2008) Aurélie Moya et al.   MARINE BIOTECHNOLOGY

Steroid metabolism in cnidarians: Insights from Nematostella vectensis

(2008) Ann M. Tarrant et al.   MOLECULAR AND CELLULAR ENDOCRINOLOGY

Metabolic interactions between algal symbionts and invertebrate hosts

(2008) DAVID YELLOWLEES et al.   PLANT CELL AND ENVIRONMENT

Diversity and Evolution of Coral Fluorescent Proteins

(2008) Naila O. Alieva et al.   PLoS One

NPC1/NPC2 function as a tag team duo to mobilize cholesterol

(2008) K. Subramanian et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA