Reticulate evolution and sea-level fluctuations together drove species diversification of slipper orchids (Paphiopedilum) in South-East Asia

Multiple hybridization events, polyploidy and low postmating isolation entangle the evolution of neotropical species of Epidendrum (Orchidaceae)

(2014) Isabel Marques et al.   BMC EVOLUTIONARY BIOLOGY

An evaluation of taxonomic concepts of the widespread plant genus Aglaia and its allies across Wallace’s Line (tribe Aglaieae, Meliaceae)

(2014) Melanie Grudinski et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Evidence for Isolation-by-Habitat among Populations of an Epiphytic Orchid Species on a Small Oceanic Island

(2014) Bertrand Mallet et al.   PLoS One

Automatic Detection of Key Innovations, Rate Shifts, and Diversity-Dependence on Phylogenetic Trees

(2014) Daniel L. Rabosky   PLoS One

BAMMtools: an R package for the analysis of evolutionary dynamics on phylogenetic trees

(2014) Daniel L. Rabosky et al.   Methods in Ecology and Evolution

Evolutionary Processes of Diversification in a Model Island Archipelago

(2013) Rafe M. Brown et al.   Annual Review of Ecology Evolution and Systematics

Nuclear and chloroplast DNA phylogeography reveals Pleistocene divergence and subsequent secondary contact of two genetic lineages of the tropical rainforest tree speciesShorea leprosula(Dipterocarpaceae) in South-East Asia

(2013) Masato Ohtani et al.   MOLECULAR ECOLOGY

Taxonomic placement of Paphiopedilum canhii (Cypripedioideae; Orchidaceae) based on cytological, molecular and micromorphological evidence

(2013) Marcin Górniak et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A Six Nuclear Gene Phylogeny of Citrus (Rutaceae) Taking into Account Hybridization and Lineage Sorting

(2013) Chandrika Ramadugu et al.   PLoS One

Unraveling reticulate evolution in North American Dryopteris (Dryopteridaceae)

(2012) Emily B Sessa et al.   BMC EVOLUTIONARY BIOLOGY

Molecular phylogenetics of Paphiopedilum (Cypripedioideae; Orchidaceae) based on nuclear ribosomal ITS and plastid sequences

(2012) Araya Chochai et al.   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

RECONSTRUCTING THE COMPLEX EVOLUTIONARY ORIGIN OF WILD ALLOPOLYPLOID TOBACCOS (NICOTIANASECTIONSUAVEOLENTES)

(2012) Laura J. Kelly et al.   EVOLUTION

Reticulate evolution on a global scale: A nuclear phylogeny for New World Dryopteris (Dryopteridaceae)

(2012) Emily B. Sessa et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Three genome-based phylogeny of Cupressaceae s.l.: Further evidence for the evolution of gymnosperms and Southern Hemisphere biogeography

(2012) Zu-Yu Yang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Coalescent Simulations Reveal Hybridization and Incomplete Lineage Sorting in Mediterranean Linaria

(2012) José Luis Blanco-Pastor et al.   PLoS One

Evolution and Biogeography of the Slipper Orchids: Eocene Vicariance of the Conduplicate Genera in the Old and New World Tropics

(2012) Yan-Yan Guo et al.   PLoS One

Distinct Niche Divergence Characterizes the Homoploid Hybrid Speciation of Pinus densata on the Tibetan Plateau

(2011) Jian-Feng Mao et al.   AMERICAN NATURALIST

Biogeography of the Indo-Australian Archipelago

(2011) David J. Lohman et al.   Annual Review of Ecology Evolution and Systematics

Dynamic distribution patterns of ribosomal DNA and chromosomal evolution in Paphiopedilum, a lady's slipper orchid

(2011) Tianying Lan et al.   BMC PLANT BIOLOGY

West to east dispersal and subsequent rapid diversification of the mega-diverse genus Begonia (Begoniaceae) in the Malesian archipelago

(2011) D. C. Thomas et al.   JOURNAL OF BIOGEOGRAPHY

Giant taro and its relatives: A phylogeny of the large genus Alocasia (Araceae) sheds light on Miocene floristic exchange in the Malesian region

(2011) Lars Nauheimer et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Reticulate evolution in diploid and tetraploid species of Polystachya (Orchidaceae) as shown by plastid DNA sequences and low-copy nuclear genes

(2010) Anton Russell et al.   ANNALS OF BOTANY

Hawaiian angiosperm radiations of North American origin

(2010) B. G. Baldwin et al.   ANNALS OF BOTANY

Biogeography and conservation in Southeast Asia: how 2.7 million years of repeated environmental fluctuations affect today’s patterns and the future of the remaining refugial-phase biodiversity

(2010) David S. Woodruff   BIODIVERSITY AND CONSERVATION

RDP3: a flexible and fast computer program for analyzing recombination

(2010) D. P. Martin et al.   BIOINFORMATICS

Hybrid floral scent novelty drives pollinator shift in sexually deceptive orchids

(2010) Nicolas J Vereecken et al.   BMC EVOLUTIONARY BIOLOGY

Hybridization and introgression across different ploidy levels in the Neotropical orchids Epidendrum fulgens and E. puniceoluteum (Orchidaceae)

(2010) FÁBIO PINHEIRO et al.   MOLECULAR ECOLOGY

S-DIVA (Statistical Dispersal-Vicariance Analysis): A tool for inferring biogeographic histories

(2010) Yan Yu et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Pollination Efficiency and the Evolution of Specialized Deceptive Pollination Systems

(2009) Giovanni Scopece et al.   AMERICAN NATURALIST

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Evolutionary divergence times in the Annonaceae: evidence of a late Miocene origin of Pseuduvaria in Sundaland with subsequent diversification in New Guinea

(2009) Yvonne CF Su et al.   BMC EVOLUTIONARY BIOLOGY

Intragenic Recombination Events and Evidence for Hybrid Speciation in Nicotiana (Solanaceae)

(2009) Laura J. Kelly et al.   MOLECULAR BIOLOGY AND EVOLUTION

The role of repeated sea-level fluctuations in the generation of shrew (Soricidae: Crocidura) diversity in the Philippine Archipelago

(2009) Jacob A. Esselstyn et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Adaptation and diversification on islands

(2009) Jonathan B. Losos et al.   NATURE

The current refugial rainforests of Sundaland are unrepresentative of their biogeographic past and highly vulnerable to disturbance

(2009) C. H. Cannon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Accounting for Calibration Uncertainty in Phylogenetic Estimation of Evolutionary Divergence Times

(2009) Simon Y. W. Ho et al.   SYSTEMATIC BIOLOGY

Hybrid Origins and Homoploid Reticulate Evolution within Heliosperma (Sileneae, Caryophyllaceae)—A Multigene Phylogenetic Approach with Relative Dating

(2009) Božo Frajman et al.   SYSTEMATIC BIOLOGY

Scent variation and hybridization cause the displacement of a sexually deceptive orchid species

(2008) Johannes Stökl et al.   AMERICAN JOURNAL OF BOTANY

Pollinator convergence and the nature of species' boundaries in sympatric Sardinian Ophrys (Orchidaceae)

(2008) P. Cortis et al.   ANNALS OF BOTANY

Morphometric and population genetic analyses elucidate the origin, evolutionary significance and conservation implications ofOrchis × angusticruris(O. purpurea × O. simia), a hybrid orchid new to Britain

(2008) RICHARD M. BATEMAN et al.   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

The origin and evolution of Indomalesian, Australasian and Pacific island biotas: insights from Aglaieae (Meliaceae, Sapindales)

(2008) Alexandra N. Muellner et al.   JOURNAL OF BIOGEOGRAPHY

Reticulate evolution in Thuja inferred from multiple gene sequences: Implications for the study of biogeographical disjunction between eastern Asia and North America

(2008) Dan Peng et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Pollination by deceit inPaphiopedilum barbigerum(Orchidaceae): a staminode exploits the innate colour preferences of hoverflies (Syrphidae)

(2008) J. Shi et al.   PLANT BIOLOGY

The Reticulate History of Medicago (Fabaceae)

(2008) Iván J. Maureira-Butler et al.   SYSTEMATIC BIOLOGY