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Title
Computational modeling of cytokine signaling in microglia
Authors
Keywords
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Journal
Molecular BioSystems
Volume 11, Issue 12, Pages 3332-3346
Publisher
Royal Society of Chemistry (RSC)
Online
2015-09-30
DOI
10.1039/c5mb00488h
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Note: Only part of the references are listed.- Adiponectin fine-tuning of liver regeneration dynamics revealed through cellular network modelling
- (2015) Jason M. Correnti et al. JOURNAL OF PHYSIOLOGY-LONDON
- Temporal-logic analysis of microglial phenotypic conversion with exposure to amyloid-β
- (2015) Thomas J. Anastasio Molecular BioSystems
- Computational identification of potential multi-drug combinations for reduction of microglial inflammation in Alzheimer disease
- (2015) Thomas J. Anastasio Frontiers in Pharmacology
- Comparison of approaches for parameter identifiability analysis of biological systems
- (2014) A. Raue et al. BIOINFORMATICS
- Network dynamics determine the autocrine and paracrine signaling functions of TNF
- (2014) Andrew B. Caldwell et al. GENES & DEVELOPMENT
- Transcriptome-Based Network Analysis Reveals a Spectrum Model of Human Macrophage Activation
- (2014) Jia Xue et al. IMMUNITY
- Macrophage Polarization Drives Granuloma Outcome during Mycobacterium tuberculosis Infection
- (2014) Simeone Marino et al. INFECTION AND IMMUNITY
- An RNA-Sequencing Transcriptome and Splicing Database of Glia, Neurons, and Vascular Cells of the Cerebral Cortex
- (2014) Y. Zhang et al. JOURNAL OF NEUROSCIENCE
- Differences in the Phagocytic Response of Microglia and Peripheral Macrophages after Spinal Cord Injury and Its Effects on Cell Death
- (2014) A. D. Greenhalgh et al. JOURNAL OF NEUROSCIENCE
- A role for the ITAM signaling module in specifying cytokine-receptor functions
- (2014) Jelena S Bezbradica et al. NATURE IMMUNOLOGY
- TNF and Increased Intracellular Iron Alter Macrophage Polarization to a Detrimental M1 Phenotype in the Injured Spinal Cord
- (2014) Antje Kroner et al. NEURON
- Overexpression of Heat Shock Protein 72 Attenuates NF-κB Activation Using a Combination of Regulatory Mechanisms in Microglia
- (2014) Patrick W. Sheppard et al. PLoS Computational Biology
- Mathematical Modeling of Pro- and Anti-Inflammatory Signaling in Macrophages
- (2014) Shreya Maiti et al. Processes
- Parameter set selection for dynamic systems under uncertainty via dynamic optimization and hierarchical clustering
- (2013) Wei Dai et al. AICHE JOURNAL
- Angiotensin II causes imbalance between pro- and anti-inflammatory cytokines by modulating GSK-3β in neuronal culture
- (2013) Deepmala Agarwal et al. BRITISH JOURNAL OF PHARMACOLOGY
- Microglia Promote Learning-Dependent Synapse Formation through Brain-Derived Neurotrophic Factor
- (2013) Christopher N. Parkhurst et al. CELL
- Toll-Like Receptor 4-Dependent Microglial Activation Mediates Spinal Cord Ischemia-Reperfusion Injury
- (2013) M. T. Bell et al. CIRCULATION
- Functional characteristics of a double negative feedback loop mediated by microRNAs
- (2013) Shuiming Cai et al. Cognitive Neurodynamics
- Age-associated alterations in the time-dependent profile of pro- and anti-inflammatory proteins within the hippocampus in response to acute exposure to interleukin-1β
- (2013) Sarah C. Hopp et al. JOURNAL OF NEUROIMMUNOLOGY
- TNF- Downregulates Inhibitory Neurotransmission through Protein Phosphatase 1-Dependent Trafficking of GABAA Receptors
- (2013) H. Pribiag et al. JOURNAL OF NEUROSCIENCE
- Identification of a unique TGF-β–dependent molecular and functional signature in microglia
- (2013) Oleg Butovsky et al. NATURE NEUROSCIENCE
- The microglial sensome revealed by direct RNA sequencing
- (2013) Suzanne E Hickman et al. NATURE NEUROSCIENCE
- Universality in network dynamics
- (2013) Baruch Barzel et al. Nature Physics
- Microglia are the major source of TNF-α and TGF-β1 in postnatal glial cultures; regulation by cytokines, lipopolysaccharide, and vitronectin
- (2013) Jennifer V. Welser-Alves et al. NEUROCHEMISTRY INTERNATIONAL
- An Agent-Based Model of Cellular Dynamics and Circadian Variability in Human Endotoxemia
- (2013) Tung T. Nguyen et al. PLoS One
- Multi-Scale Modeling Predicts a Balance of Tumor Necrosis Factor-α and Interleukin-10 Controls the Granuloma Environment during Mycobacterium tuberculosis Infection
- (2013) Nicholas A. Cilfone et al. PLoS One
- Modeling the Intra- and Extracellular Cytokine Signaling Pathway under Heat Stroke in the Liver
- (2013) Maria Rodriguez-Fernandez et al. PLoS One
- Analysis of Serum Inflammatory Mediators Identifies Unique Dynamic Networks Associated with Death and Spontaneous Survival in Pediatric Acute Liver Failure
- (2013) Nabil Azhar et al. PLoS One
- Parameter Space Compression Underlies Emergent Theories and Predictive Models
- (2013) B. B. Machta et al. SCIENCE
- Computational Modeling of Inflammation and Wound Healing
- (2013) Cordelia Ziraldo et al. Advances in Wound Care
- Transcriptome analysis of amoeboid and ramified microglia isolated from the corpus callosum of rat brain
- (2012) Rangarajan Parakalan et al. BMC NEUROSCIENCE
- The “quad-partite” synapse: Microglia-synapse interactions in the developing and mature CNS
- (2012) Dorothy P. Schafer et al. GLIA
- LPS-induced release of IL-6 from glia modulates production of IL-1β in a JAK2-dependent manner
- (2012) Aedín M Minogue et al. Journal of Neuroinflammation
- A system mathematical model of a cell–cell communication network in amyotrophic lateral sclerosis
- (2012) Hongwei Shao et al. Molecular BioSystems
- TNF receptor 1 genetic risk mirrors outcome of anti-TNF therapy in multiple sclerosis
- (2012) Adam P. Gregory et al. NATURE
- Dynamics of a Cytokine Storm
- (2012) Hao Hong Yiu et al. PLoS One
- Quantitative characterization and analysis of the dynamic NF-κB response in microglia
- (2011) Patrick W Sheppard et al. BMC BIOINFORMATICS
- Robust dynamic balance of AP-1 transcription factors in a neuronal gene regulatory network
- (2011) Gregory M Miller et al. BMC Systems Biology
- A comparison of two sampling methods for global sensitivity analysis
- (2011) Stefano Tarantola et al. COMPUTER PHYSICS COMMUNICATIONS
- Glutamate released by Japanese encephalitis virus-infected microglia involves TNF-α signaling and contributes to neuronal death
- (2011) Chun-Jung Chen et al. GLIA
- Autonomic-Immune-Vascular Interaction
- (2011) Jasenka Zubcevic et al. HYPERTENSION
- Investigation of IL-6 and IL-10 signalling via mathematical modelling
- (2011) C. Moya et al. IET Systems Biology
- Classically and alternatively activated bone marrow derived macrophages differ in cytoskeletal functions and migration towards specific CNS cell types
- (2011) Elly JF Vereyken et al. Journal of Neuroinflammation
- Microglia and Memory: Modulation by Early-Life Infection
- (2011) L. L. Williamson et al. JOURNAL OF NEUROSCIENCE
- Repertoire of microglial and macrophage responses after spinal cord injury
- (2011) Samuel David et al. NATURE REVIEWS NEUROSCIENCE
- Physiology of Microglia
- (2011) Helmut Kettenmann et al. PHYSIOLOGICAL REVIEWS
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- (2011) R. C. Paolicelli et al. SCIENCE
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- (2011) C. S. Cheng et al. Science Signaling
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- Tumor necrosis factor-alpha mediated signaling in neuronal homeostasis and dysfunction
- (2010) Keigan M. Park et al. CELLULAR SIGNALLING
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- (2009) Wenzhe Ma et al. CELL
- Inverse problems in systems biology
- (2009) Heinz W Engl et al. INVERSE PROBLEMS
- Inflammation mediates varying effects in neurogenesis: relevance to the pathogenesis of brain injury and neurodegenerative disorders
- (2009) Nicholas P. Whitney et al. JOURNAL OF NEUROCHEMISTRY
- The Immune Adaptor Molecule SARM Modulates Tumor Necrosis Factor Alpha Production and Microglia Activation in the Brainstem and Restricts West Nile Virus Pathogenesis
- (2009) K. J. Szretter et al. JOURNAL OF VIROLOGY
- Discrete logic modelling as a means to link protein signalling networks with functional analysis of mammalian signal transduction
- (2009) Julio Saez-Rodriguez et al. Molecular Systems Biology
- TNF signaling inhibition in the CNS: implications for normal brain function and neurodegenerative disease
- (2008) Melissa K McCoy et al. Journal of Neuroinflammation
- The timing of TNF and IFN-γ signaling affects macrophage activation strategies during Mycobacterium tuberculosis infection
- (2008) J. Christian J. Ray et al. JOURNAL OF THEORETICAL BIOLOGY
- An ensemble of models of the acute inflammatory response to bacterial lipopolysaccharide in rats: Results from parameter space reduction
- (2008) Silvia Daun et al. JOURNAL OF THEORETICAL BIOLOGY
- Detailed qualitative dynamic knowledge representation using a BioNetGen model of TLR-4 signaling and preconditioning
- (2008) Gary C. An et al. MATHEMATICAL BIOSCIENCES
- TLR-4 deficiency protects against focal cerebral ischemia and axotomy-induced neurodegeneration
- (2008) Ulkan Kilic et al. NEUROBIOLOGY OF DISEASE
- Microglial activation and TNF production mediate altered CNS excitability following peripheral inflammation
- (2008) K. Riazi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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