Global Transcriptional Profiling of Diapause and Climatic Adaptation inDrosophila melanogaster

Secondary contact and local adaptation contribute to genome-wide patterns of clinal variation inDrosophila melanogaster

(2016) Alan O. Bergland et al.   MOLECULAR ECOLOGY

Seasonal variation in life history traits in twoDrosophilaspecies

(2015) E. L. Behrman et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Spatially varying selection shapes life history clines among populations ofDrosophila melanogasterfrom sub-Saharan Africa

(2015) D. K. Fabian et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Population genomic analysis uncovers African and European admixture inDrosophila melanogasterpopulations from the south-eastern United States and Caribbean Islands

(2015) Joyce Y. Kao et al.   MOLECULAR ECOLOGY

Key molecular processes of the diapause to post-diapause quiescence transition in the alfalfa leafcutting beeMegachile rotundataidentified by comparative transcriptome analysis

(2015) George D. Yocum et al.   PHYSIOLOGICAL ENTOMOLOGY

Identification of FOXO targets that generate diverse features of the diapause phenotype in the mosquitoCulex pipiens

(2015) Cheolho Sim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A highly pleiotropic amino acid polymorphism in theDrosophilainsulin receptor contributes to life-history adaptation

(2014) Annalise B. Paaby et al.   EVOLUTION

Parallel Geographic Variation in Drosophila melanogaster

(2014) Josie A. Reinhardt et al.   GENETICS

The Sleeping Beauty: How Reproductive Diapause Affects Hormone Signaling, Metabolism, Immune Response and Somatic Maintenance in Drosophila melanogaster

(2014) Olga I. Kubrak et al.   PLoS One

Variation in Drosophila melanogaster central metabolic genes appears driven by natural selection both within and between populations

(2014) R. Cogni et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Role for Circadian Clock Genes in Seasonal Timing: Testing the Bünning Hypothesis

(2014) Mirko Pegoraro et al.   PLoS Genetics

Genetic Dissection of the Drosophila melanogaster Female Head Transcriptome Reveals Widespread Allelic Heterogeneity

(2014) Elizabeth G. King et al.   PLoS Genetics

Genomic Evidence of Rapid and Stable Adaptive Oscillations over Seasonal Time Scales in Drosophila

(2014) Alan O. Bergland et al.   PLoS Genetics

EBSeq: an empirical Bayes hierarchical model for inference in RNA-seq experiments

(2013) N. Leng et al.   BIOINFORMATICS

Juvenile hormone regulation of Drosophila aging

(2013) Rochele Yamamoto et al.   BMC BIOLOGY

THE INTENSITY OF SELECTION ACTING ON THECOUCH POTATOGENE-SPATIAL-TEMPORAL VARIATION IN A DIAPAUSE CLINE

(2013) Rodrigo Cogni et al.   EVOLUTION

Latitudinal Variation in Starvation Resistance is Explained by Lipid Content in Natural Populations of Drosophila melanogaster

(2013) Julieta Goenaga et al.   Evolutionary Biology

Transcriptional evidence for small RNA regulation of pupal diapause in the flesh fly, Sarcophaga bullata

(2013) Julie A. Reynolds et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Evolutionary Links Between Circadian Clocks and Photoperiodic Diapause in Insects

(2013) M. E. Meuti et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Fluctuating viability selection on morphology of cliff swallows is driven by climate

(2013) C. R. Brown et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

RNA-Seq reveals early distinctions and late convergence of gene expression between diapause and quiescence in the Asian tiger mosquito, Aedes albopictus

(2013) M. F. Poelchau et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Clinal variation in fitness related traits in tropical drosophilids of the Indian subcontinent

(2013) Subhash Rajpurohit et al.   JOURNAL OF THERMAL BIOLOGY

Inference of chromosomal inversion dynamics from Pool-Seq data in natural and laboratory populations ofDrosophila melanogaster

(2013) Martin Kapun et al.   MOLECULAR ECOLOGY

Polymorphism in theneurofibromingene,Nf1, is associated with antagonistic selection on wing size and development time inDrosophila melanogaster

(2013) Siu F. Lee et al.   MOLECULAR ECOLOGY

Analysis of the Host Transcriptome from Demyelinating Spinal Cord of Murine Coronavirus-Infected Mice

(2013) Ruth Elliott et al.   PLoS One

Opposing selection and environmental variation modify optimal timing of breeding

(2013) C. E. Tarwater et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Deep sequencing reveals complex mechanisms of diapause preparation in the invasive mosquito, Aedes albopictus

(2013) M. F. Poelchau et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Life-History Evolution and the Polyphenic Regulation of Somatic Maintenance and Survival

(2013) Thomas Flatt et al.   QUARTERLY REVIEW OF BIOLOGY

Insulin signaling and the regulation of insect diapause

(2013) Cheolho Sim et al.   Frontiers in Physiology

Insect photoperiodism: Measuring the night

(2012) D.S. Saunders   JOURNAL OF INSECT PHYSIOLOGY

Genome-wide patterns of latitudinal differentiation among populations ofDrosophila melanogasterfrom North America

(2012) Daniel K. Fabian et al.   MOLECULAR ECOLOGY

Population Genomics of Sub-Saharan Drosophila melanogaster: African Diversity and Non-African Admixture

(2012) John E. Pool et al.   PLoS Genetics

Selective maintenance of Drosophila tandemly arranged duplicated genes during evolution

(2012) Carlos Quijano et al.   GENOME BIOLOGY

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Genome-Wide Analysis of Self-Renewal in Drosophila Neural Stem Cells by Transgenic RNAi

(2011) Ralph A. Neumüller et al.   Cell Stem Cell

RNA-Seq and find: entering the RNA deep field

(2011) Adam Roberts et al.   Genome Medicine

Whole-Genome Expression Plasticity across Tropical and Temperate Drosophila melanogaster Populations from Eastern Australia

(2010) M. T. Levine et al.   MOLECULAR BIOLOGY AND EVOLUTION

Identification of a candidate adaptive polymorphism forDrosophilalife history by parallel independent clines on two continents

(2010) ANNALISE B. PAABY et al.   MOLECULAR ECOLOGY

A clinally varying promoter polymorphism associated with adaptive variation in wing size inDrosophila

(2010) S. W. McKECHNIE et al.   MOLECULAR ECOLOGY

Mechanisms of suspended animation are revealed by transcript profiling of diapause in the flesh fly

(2010) G. J. Ragland et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular Evolution and Functional Characterization of Drosophila Insulin-Like Peptides

(2010) Sebastian Grönke et al.   PLoS Genetics

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Gene expression during Drosophila melanogaster egg development before and after reproductive diapause

(2009) Dean A Baker et al.   BMC GENOMICS

Clinal variation in developmental time and viability, and the response to thermal treatments in two species of Drosophila

(2008) GUILLERMO FOLGUERA et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

REPRODUCTIVE DIAPAUSE AND LIFE-HISTORY CLINES IN NORTH AMERICAN POPULATIONS OF DROSOPHILA MELANOGASTER

(2008) Paul S. Schmidt et al.   EVOLUTION

Genomic Analysis of Adaptive Differentiation in Drosophila melanogaster

(2008) T. L. Turner et al.   GENETICS

Variations in body melanisation, ovariole number and fecundity in highland and lowland populations ofDrosophila melanogasterfrom the Indian subcontinent

(2008) Subhash Rajpurohit et al.   Insect Science

Drosophila short neuropeptide F signalling regulates growth by ERK-mediated insulin signalling

(2008) Kyu-Sun Lee et al.   NATURE CELL BIOLOGY

Association of the circadian rhythmic expression of GmCRY1a with a latitudinal cline in photoperiodic flowering of soybean

(2008) Q. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Insulin signaling and FOXO regulate the overwintering diapause of the mosquito Culex pipiens

(2008) C. Sim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An amino acid polymorphism in the couch potato gene forms the basis for climatic adaptation in Drosophila melanogaster

(2008) P. S. Schmidt et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Body melanization and its adaptive role in thermoregulation and tolerance against desiccating conditions in drosophilids

(2008) Subhash RAJPUROHIT et al.   ENTOMOLOGICAL RESEARCH

Diet controls normal and tumorous germline stem cells via insulin-dependent and -independent mechanisms in Drosophila

(2007) Hwei-Jan Hsu et al.   DEVELOPMENTAL BIOLOGY

Coexpression, coregulation, and cofunctionality of neighboring genes in eukaryotic genomes

(2007) Pawel Michalak   GENOMICS