The Kinetic and Thermodynamic Aftermath of Horizontal Gene Transfer Governs Evolutionary Recovery

The Evolution of Genes within Genes and the Control of DNA Replication in Microviruses

(2014) S. M. Doore et al.   MOLECULAR BIOLOGY AND EVOLUTION

Changing Folding and Binding Stability in a Viral Coat Protein: A Comparison between Substitutions Accessible through Mutation and Those Fixed by Natural Selection

(2014) Craig R. Miller et al.   PLoS One

Environment Determines Epistatic Patterns for a ssDNA Virus

(2013) S. Brian Caudle et al.   GENETICS

Mutations in the N Terminus of the oX174 DNA Pilot Protein H Confer Defects in both Assembly and Host Cell Attachment

(2013) L. N. Young et al.   JOURNAL OF VIROLOGY

Icosahedral bacteriophage ΦX174 forms a tail for DNA transport during infection

(2013) Lei Sun et al.   NATURE

Selection Affects Genes Involved in Replication during Long-Term Evolution in Experimental Populations of the Bacteriophage φX174

(2013) Celeste J. Brown et al.   PLoS One

Chimeric viruses blur the borders between the major groups of eukaryotic single-stranded DNA viruses

(2013) Simon Roux et al.   Nature Communications

Recombination between RNA viruses and plasmids might have played a central role in the origin and evolution of small DNA viruses

(2012) Mart Krupovic   BIOESSAYS

A novel virus genome discovered in an extreme environment suggests recombination between unrelated groups of RNA and DNA viruses

(2012) Geoffrey S Diemer et al.   Biology Direct

High Expression Hampers Horizontal Gene Transfer

(2012) Chungoo Park et al.   Genome Biology and Evolution

Conformational Switch-Defective ϕX174 Internal Scaffolding Proteins Kinetically Trap Assembly Intermediates before Procapsid Formation

(2012) Emile B. Gordon et al.   JOURNAL OF VIROLOGY

Effects of an Early Conformational Switch Defect during  X174 Morphogenesis Are Belatedly Manifested Late in the Assembly Pathway

(2012) E. B. Gordon et al.   JOURNAL OF VIROLOGY

Novel Bacteriophages Containing a Genome of Another Bacteriophage within Their Genomes

(2012) Maud M. Swanson et al.   PLoS One

Protein misinteraction avoidance causes highly expressed proteins to evolve slowly

(2012) J.-R. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolutionary Recovery of a Recombinant Viral Genome

(2012) Rachael Springman et al.   G3-Genes Genomes Genetics

In Vitro Assembly of the øX174 Procapsid from External Scaffolding Protein Oligomers and Early Pentameric Assembly Intermediates

(2011) James E. Cherwa et al.   JOURNAL OF MOLECULAR BIOLOGY

Uncoupling the functions of a multifunctional protein: The isolation of a DNA pilot protein mutant that affects particle morphogenesis

(2011) James E. Cherwa et al.   VIROLOGY

Evolution of mosaically related tailed bacteriophage genomes seen through the lens of phage P22 virion assembly

(2011) Sherwood R. Casjens et al.   VIROLOGY

Recombination in Eukaryotic Single Stranded DNA Viruses

(2011) Darren P. Martin et al.   Viruses-Basel

Positive selection at high temperature reduces gene transcription in the bacteriophage ϕX174

(2010) Celeste J Brown et al.   BMC EVOLUTIONARY BIOLOGY

The Complexity Hypothesis Revisited: Connectivity Rather Than Function Constitutes a Barrier to Horizontal Gene Transfer

(2010) O. Cohen et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Genetics of Adaptation for Eight Microvirid Bacteriophages

(2009) Darin R. Rokyta et al.   JOURNAL OF MOLECULAR EVOLUTION

Viral Adaptation to an Antiviral Protein Enhances the Fitness Level to Above That of the Uninhibited Wild Type

(2009) J. E. Cherwa et al.   JOURNAL OF VIROLOGY

Complete Virion Assembly with Scaffolding Proteins Altered in the Ability To Perform a Critical Conformational Switch

(2009) J. E. Cherwa et al.   JOURNAL OF VIROLOGY

Genic Incompatibilities in Two Hybrid Bacteriophages

(2009) D. R. Rokyta et al.   MOLECULAR BIOLOGY AND EVOLUTION

N-terminal deletions of the øX174 external scaffolding protein affect the timing and fidelity of assembly

(2009) Asako Uchiyama et al.   VIROLOGY

Scaffolding Proteins Altered in the Ability To Perform a Conformational Switch Confer Dominant Lethal Assembly Defects

(2008) J. E. Cherwa et al.   JOURNAL OF VIROLOGY

Widely Conserved Recombination Patterns among Single-Stranded DNA Viruses

(2008) P. Lefeuvre et al.   JOURNAL OF VIROLOGY