Making the Bend: DNA Tertiary Structure and Protein-DNA Interactions
Published 2014 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Making the Bend: DNA Tertiary Structure and Protein-DNA Interactions
Authors
Keywords
-
Journal
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
Volume 15, Issue 7, Pages 12335-12363
Publisher
MDPI AG
Online
2014-07-14
DOI
10.3390/ijms150712335
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- A Polymerase Theta-dependent repair pathway suppresses extensive genomic instability at endogenous G4 DNA sites
- (2014) Wouter Koole et al. Nature Communications
- Biophysical properties of nucleic acids at surfaces relevant to microarray performance
- (2014) Archana N. Rao et al. Biomaterials Science
- Unmethylated and methylated CpG dinucleotides distinctively regulate the physical properties of DNA
- (2013) Isabel Jimenez-Useche et al. BIOPOLYMERS
- Structural insights into how 5-hydroxymethylation influences transcription factor binding
- (2013) Lukas Lercher et al. CHEMICAL COMMUNICATIONS
- Linking the Enzymes that Unlink DNA
- (2013) Steven J. Brill MOLECULAR CELL
- Quantitative visualization of DNA G-quadruplex structures in human cells
- (2013) Giulia Biffi et al. Nature Chemistry
- Human Rev1 polymerase disrupts G-quadruplex DNA
- (2013) S. Eddy et al. NUCLEIC ACIDS RESEARCH
- Crystal structure of RuvC resolvase in complex with Holliday junction substrate
- (2013) Karolina M. Górecka et al. NUCLEIC ACIDS RESEARCH
- Highlights of the DNA cutters: a short history of the restriction enzymes
- (2013) Wil A. M. Loenen et al. NUCLEIC ACIDS RESEARCH
- G-quadruplex structures are stable and detectable in human genomic DNA
- (2013) Enid Yi Ni Lam et al. Nature Communications
- Genomic Regions Flanking E-Box Binding Sites Influence DNA Binding Specificity of bHLH Transcription Factors through DNA Shape
- (2013) Raluca Gordân et al. Cell Reports
- DNA structure, nucleosome placement and chromatin remodelling: a perspective
- (2012) Andrew A. Travers et al. BIOCHEMICAL SOCIETY TRANSACTIONS
- Indirect Readout of DNA Sequence by P22 Repressor: Roles of DNA and Protein Functional Groups in Modulating DNA Conformation
- (2012) Lydia-Ann Harris et al. JOURNAL OF MOLECULAR BIOLOGY
- The Importance of the N-Terminus of T7 Endonuclease I in the Interaction with DNA Junctions
- (2012) Alasdair D.J. Freeman et al. JOURNAL OF MOLECULAR BIOLOGY
- Hidden complexity in the isomerization dynamics of Holliday junctions
- (2012) Changbong Hyeon et al. Nature Chemistry
- Extreme Bendability of DNA Less than 100 Base Pairs Long Revealed by Single-Molecule Cyclization
- (2012) R. Vafabakhsh et al. SCIENCE
- TEAD1-dependent expression of the FoxO3a gene in mouse skeletal muscle
- (2011) Haifang Qiu et al. BMC MOLECULAR BIOLOGY
- G-quadruplex-induced instability during leading-strand replication
- (2011) Judith Lopes et al. EMBO JOURNAL
- Coordination of DNA replication and recombination activities in the maintenance of genome stability
- (2011) Robyn L. Maher et al. JOURNAL OF CELLULAR BIOCHEMISTRY
- Is DNA’s Rigidity Dominated by Electrostatic or Nonelectrostatic Interactions?
- (2011) Alexey Savelyev et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Recognition of methylated DNA through methyl-CpG binding domain proteins
- (2011) Xueqing Zou et al. NUCLEIC ACIDS RESEARCH
- Mapping the sequences of potential guanine quadruplex motifs
- (2011) Alan K. Todd et al. NUCLEIC ACIDS RESEARCH
- Adenosine deaminases acting on RNA (ADARs) are both antiviral and proviral
- (2011) Charles E. Samuel VIROLOGY
- Features and development ofCoot
- (2010) P. Emsley et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Origins of Specificity in Protein-DNA Recognition
- (2010) Remo Rohs et al. Annual Review of Biochemistry
- Mutual Relationship between Stacking and Hydrogen Bonding in DNA. Theoretical Study of Guanine−Cytosine, Guanine−5-methylcytosine, and Their Dimers
- (2010) Carles Acosta-Silva et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Discrimination of Methylcytosine from Hydroxymethylcytosine in DNA Molecules
- (2010) Meni Wanunu et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Structure of the LexA–DNA complex and implications for SOS box measurement
- (2010) Adrianna P. P. Zhang et al. NATURE
- Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs
- (2010) Malka Kitayner et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Crystal structure of a junction between two Z-DNA helices
- (2010) M. de Rosa et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Structures of restriction endonucleaseHindIII in complex with its cognate DNA and divalent cations
- (2009) Nobuhisa Watanabe et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Non-B DNA structure-induced genetic instability and evolution
- (2009) Junhua Zhao et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Specificity and Affinity of Lac Repressor for the Auxiliary Operators O2 and O3 Are Explained by the Structures of Their Protein–DNA Complexes
- (2009) Julija Romanuka et al. JOURNAL OF MOLECULAR BIOLOGY
- The role of DNA shape in protein–DNA recognition
- (2009) Remo Rohs et al. NATURE
- Conformational analysis of nucleic acids revisited: Curves+
- (2009) R. Lavery et al. NUCLEIC ACIDS RESEARCH
- The unique structure of A-tracts and intrinsic DNA bending
- (2009) Tali E. Haran et al. QUARTERLY REVIEWS OF BIOPHYSICS
- Local DNA Topography Correlates with Functional Noncoding Regions of the Human Genome
- (2009) S. C. J. Parker et al. SCIENCE
- The Yeast Pif1 Helicase Prevents Genomic Instability Caused by G-Quadruplex-Forming CEB1 Sequences In Vivo
- (2009) Cyril Ribeyre et al. PLoS Genetics
- FANCJ Is a Structure-specific DNA Helicase Associated with the Maintenance of Genomic G/C Tracts
- (2008) Timothy B. C. London et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- The Human RecQ Helicases, BLM and RECQ1, Display Distinct DNA Substrate Specificities
- (2008) Venkateswarlu Popuri et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- The DNA-encoded nucleosome organization of a eukaryotic genome
- (2008) Noam Kaplan et al. NATURE
- 3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures
- (2008) Xiang-Jun Lu et al. Nature Protocols
- DNA conformations and their sequence preferences
- (2008) Daniel Svozil et al. NUCLEIC ACIDS RESEARCH
- New insight into the recognition of branched DNA structure by junction-resolving enzymes
- (2007) Anne-Cécile Déclais et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Discovery of alternative DNA structures: a heroic decade (1979-1989)
- (2007) Sergei et al. Frontiers in Bioscience-Landmark
- 14-3-3 Cruciform-binding proteins as regulators of eukaryotic DNA replication
- (2007) Maria Zannis-Hadjopoulos et al. TRENDS IN BIOCHEMICAL SCIENCES
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search