Recognition of methylated DNA through methyl-CpG binding domain proteins

Solution structure and dynamic analysis of chicken MBD2 methyl binding domain bound to a target-methylated DNA sequence

(2011) J. Neel Scarsdale et al.   NUCLEIC ACIDS RESEARCH

Clone history shapes Populus drought responses

(2011) S. Raj et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Good Practices in Free-Energy Calculations

(2010) Andrew Pohorille et al.   JOURNAL OF PHYSICAL CHEMISTRY B

DNA Methylation Increases Nucleosome Compaction and Rigidity

(2010) John S. Choy et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Conserved role of intragenic DNA methylation in regulating alternative promoters

(2010) Alika K. Maunakea et al.   NATURE

Recruitment of MBD1 to target genes requires sequence-specific interaction of the MBD domain with methylated DNA

(2010) Thomas Clouaire et al.   NUCLEIC ACIDS RESEARCH

Polymorphisms and disease: hotspots of inactivation in methyltransferases

(2010) Karen Rutherford et al.   TRENDS IN BIOCHEMICAL SCIENCES

Deforming DNA: From Physics to Biology

(2009) Chantal Prévost et al.   CHEMPHYSCHEM

DNA methylation-mediated epigenetic control

(2009) Andrea Rottach et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

The R46Q, R131Q and R154H Polymorphs of Human DNA Glycosylase/β-Lyase hOgg1 Severely Distort the Active Site and DNA Recognition Site but do not Cause Unfolding

(2009) Peter C. Anderson et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

The multi-domain protein Np95 connects DNA methylation and histone modification

(2009) Andrea Rottach et al.   NUCLEIC ACIDS RESEARCH

A systematic molecular dynamics study of nearest-neighbor effects on base pair and base pair step conformations and fluctuations in B-DNA

(2009) Richard Lavery et al.   NUCLEIC ACIDS RESEARCH

Kinetic and Thermodynamic Evidence for Flipping of a Methyl-CpG Binding Domain on Methylated DNA†

(2008) Kosuke Inomata et al.   BIOCHEMISTRY

Proteins that bind methylated DNA and human cancer: reading the wrong words

(2008) L Lopez-Serra et al.   BRITISH JOURNAL OF CANCER

Methyl-CpG binding proteins: specialized transcriptional repressors or structural components of chromatin?

(2008) T. Clouaire et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Molecular dynamics simulations of nucleic acid–protein complexes

(2008) Alexander D MacKerell et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

DNA demethylation induced by the methyl-CpG-binding domain protein MBD3

(2008) Shelley E. Brown et al.   GENE

MeCP2 Binding to DNA Depends upon Hydration at Methyl-CpG

(2008) Kok Lian Ho et al.   MOLECULAR CELL