Transcriptome-Wide Single Nucleotide Polymorphisms (SNPs) for Abalone (Haliotis midae): Validation and Application Using GoldenGate Medium-Throughput Genotyping Assays

Development and Validation of Single Nucleotide Polymorphisms (SNPs) Markers from Two Transcriptome 454-Runs of Turbot (Scophthalmus maximus) Using High-Throughput Genotyping

(2013) Manuel Vera et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Integrated Linkage Map ofHaliotis midaeLinnaeus Based on Microsatellite and SNP Markers

(2013) Jessica Vervalle et al.   JOURNAL OF SHELLFISH RESEARCH

A population genetic analysis of abalone domestication events in South Africa: Implications for the management of the abalone resource

(2012) Clint Rhode et al.   AQUACULTURE

New microsatellite markers for the abalone Haliotis midae developed by 454 pyrosequencing and in silico analyses

(2012) R. Slabbert et al.   GENETICS AND MOLECULAR RESEARCH

Identification and validation of single nucleotide polymorphisms in growth- and maturation-related candidate genes in sole (Solea solea L.)

(2012) Eveline Diopere et al.   Marine Genomics

The Development of a Genome Wide SNP Set for the Barnacle Goose Branta leucopsis

(2012) Rudy M. Jonker et al.   PLoS One

Validation of single nucleotide polymorphism (SNP) markers from an immune Expressed Sequence Tag (EST) turbot, Scophthalmus maximus, database

(2011) Manuel Vera et al.   AQUACULTURE

Targeted SNP discovery in Atlantic salmon (Salmo salar) genes using a 3'UTR-primed SNP detection approach

(2011) Rune Andreassen et al.   BMC GENOMICS

Generation of genome-scale gene-associated SNPs in catfish for the construction of a high-density SNP array

(2011) Shikai Liu et al.   BMC GENOMICS

Genetic Characterization of Five Hatchery Populations of the Pacific Abalone (Haliotis discus hannai) Using Microsatellite Markers

(2011) Hye Suck An et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

The First Set of EST-derived Single Nucleotide Polymorphism Markers for Japanese Scallop, Patinopecten yessoensis

(2011) Weidong Liu et al.   JOURNAL OF THE WORLD AQUACULTURE SOCIETY

Development of genetic markers in abalone through construction of a SNP database

(2010) J.-H. Kang et al.   ANIMAL GENETICS

Development and validation of single nucleotide polymorphism markers in the eastern oyster Crassostrea virginica Gmelin by mining ESTs and resequencing

(2010) Liusuo Zhang et al.   AQUACULTURE

Historical isolation and hydrodynamically constrained gene flow in declining populations of the South-African abalone, Haliotis midae

(2010) Aletta E. Bester-van der Merwe et al.   CONSERVATION GENETICS

Optimization of de novo transcriptome assembly from next-generation sequencing data

(2010) Y. Surget-Groba et al.   GENOME RESEARCH

Development of gene-targeted SNP markers for genomic mapping in Pacific abalone Haliotis discus hannai Ino

(2010) Haigang Qi et al.   MOLECULAR BIOLOGY REPORTS

Mining transcriptome sequences towards identifying adaptive single nucleotide polymorphisms in lake whitefish species pairs (Coregonusspp. Salmonidae)

(2010) SÉBASTIEN RENAUT et al.   MOLECULAR ECOLOGY

Genome-wide SNP detection in the great titParus majorusing high throughput sequencing

(2010) NIKKIE E. M. VAN BERS et al.   MOLECULAR ECOLOGY

Application of single nucleotide polymorphisms to non-model species: a technical review

(2010) M. R. GARVIN et al.   Molecular Ecology Resources

In Vitro vs In Silico Detected SNPs for the Development of a Genotyping Array: What Can We Learn from a Non-Model Species?

(2010) Camille Lepoittevin et al.   PLoS One

Adaptation genomics: the next generation

(2010) Jessica Stapley et al.   TRENDS IN ECOLOGY & EVOLUTION

Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies

(2010) Shaolin Wang et al.   GENOME BIOLOGY

Isolation and segregation of 44 microsatellite loci in the South African abalone Haliotis midae L.

(2009) R. Slabbert et al.   ANIMAL GENETICS

Development of single nucleotide polymorphism markers for Atlantic cod (Gadus morhua) using expressed sequences

(2009) Sophie Hubert et al.   AQUACULTURE

Mining expressed sequences for single nucleotide polymorphisms in Pacific abaloneHaliotis discus hannai

(2009) Haigang Qi et al.   AQUACULTURE RESEARCH

Large scale single nucleotide polymorphism discovery in unsequenced genomes using second generation high throughput sequencing technology: applied to turkey

(2009) Hindrik HD Kerstens et al.   BMC GENOMICS

Analyses of Genetic Diversity and Parentage Within a South African Hatchery of the AbaloneHaliotis midaeLinnaeus Using Microsatellite Markers

(2009) R. Slabbert et al.   JOURNAL OF SHELLFISH RESEARCH

Sequencing technologies — the next generation

(2009) Michael L. Metzker   NATURE REVIEWS GENETICS

KEGG for representation and analysis of molecular networks involving diseases and drugs

(2009) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Discovery and evaluation of single nucleotide polymorphisms (SNPs) for Haliotis midae: a targeted EST approach

(2008) A. E. Bester et al.   ANIMAL GENETICS

Microsatellite flanking regions: a SNP mine in South African abalone (Haliotis midae)

(2008) C. Rhode et al.   ANIMAL GENETICS

BatchPrimer3: A high throughput web application for PCR and sequencing primer design

(2008) Frank M You et al.   BMC BIOINFORMATICS

Identification and characterisation of novel SNP markers in Atlantic cod: Evidence for directional selection

(2008) Thomas Moen et al.   BMC GENETICS

Enhancing genetic mapping of complex genomes through the design of highly-multiplexed SNP arrays: application to the large and unsequenced genomes of white spruce and black spruce

(2008) Nathalie Pavy et al.   BMC GENOMICS

Quality assessment parameters for EST-derived SNPs from catfish

(2008) Shaolin Wang et al.   BMC GENOMICS

Assessing the feasibility of GS FLX Pyrosequencing for sequencing the Atlantic salmon genome

(2008) Nicole L Quinn et al.   BMC GENOMICS

Isolation and Characterization of 63 Microsatellite Loci for the Abalone, Haliotis midae

(2008) Ruhan Slabbert et al.   JOURNAL OF THE WORLD AQUACULTURE SOCIETY

Identification of Genes Involved in Immune Response, Microsatellite, and SNP Markers from Expressed Sequence Tags Generated from Hemocytes of Freshwater Pearl Mussel (Hyriopsis cumingii)

(2008) Zhiyi Bai et al.   MARINE BIOTECHNOLOGY

High-throughput genotyping and mapping of single nucleotide polymorphisms in loblolly pine (Pinus taeda L.)

(2008) Andrew J. Eckert et al.   Tree Genetics & Genomes

genepop’007: a complete re-implementation of the genepop software for Windows and Linux

(2007) FRANÇOIS ROUSSET   Molecular Ecology Resources