Recent advances in nanopore-based nucleic acid analysis and sequencing

Detection of Single Biopolymers at High Current Bandwidth with Hafnium Oxide Nanopores

(2015) Joseph W. Larkin et al.   BIOPHYSICAL JOURNAL

Label-Free Optical Detection of Biomolecular Translocation through Nanopore Arrays

(2014) Andrey Ivankin et al.   ACS Nano

Atomically Thin Molybdenum Disulfide Nanopores with High Sensitivity for DNA Translocation

(2014) Ke Liu et al.   ACS Nano

High-Bandwidth Protein Analysis Using Solid-State Nanopores

(2014) Joseph Larkin et al.   BIOPHYSICAL JOURNAL

An integrated software system for analyzing nanopore data

(2014) Na Zhang et al.   CHINESE SCIENCE BULLETIN

An integrated current measurement system for nanopore analysis

(2014) Rui Gao et al.   CHINESE SCIENCE BULLETIN

Voltage-Dependent Properties of DNA Origami Nanopores

(2014) Silvia Hernández-Ainsa et al.   NANO LETTERS

Ionic Permeability and Mechanical Properties of DNA Origami Nanoplates on Solid-State Nanopores

(2013) Calin Plesa et al.   ACS Nano

Differentiation of Short, Single-Stranded DNA Homopolymers in Solid-State Nanopores

(2013) Kimberly Venta et al.   ACS Nano

Slowing DNA Translocation through a Nanopore Using a Functionalized Electrode

(2013) Padmini Krishnakumar et al.   ACS Nano

Slow DNA Transport through Nanopores in Hafnium Oxide Membranes

(2013) Joseph Larkin et al.   ACS Nano

Threading Immobilized DNA Molecules through a Solid-State Nanopore at >100 μs per Base Rate

(2013) Changbae Hyun et al.   ACS Nano

Stretching and Controlled Motion of Single-Stranded DNA in Locally Heated Solid-State Nanopores

(2013) Maxim Belkin et al.   ACS Nano

DNA Origami Nanopores for Controlling DNA Translocation

(2013) Silvia Hernández-Ainsa et al.   ACS Nano

Boron Nitride Nanopores: Highly Sensitive DNA Single-Molecule Detectors

(2013) Song Liu et al.   ADVANCED MATERIALS

Two-Way Nanopore Sensing of Sequence-Specific Oligonucleotides and Small-Molecule Targets in Complex Matrices Using Integrated DNA Supersandwich Structures

(2013) Nannan Liu et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Nanopore-Based Sequencing and Detection of Nucleic Acids

(2013) Yi-Lun Ying et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Mechanism of How Salt-Gradient-Induced Charges Affect the Translocation of DNA Molecules through a Nanopore

(2013) Yuhui He et al.   BIOPHYSICAL JOURNAL

Single-molecule DNA detection using a novel SP1 protein nanopore

(2013) Hai-Yan Wang et al.   CHEMICAL COMMUNICATIONS

From next-generation sequencing to nanopore sequencing technology: paving the way to personalized genomic medicine

(2013) Chee-Seng Ku et al.   Expert Review of Medical Devices

207 Nanopore immobilization of DNA polymerase enhances single-molecule sequencing

(2013) Joseph Larkin et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

A Nanopore–Nanofiber Mesh Biosensor To Control DNA Translocation

(2013) Allison H. Squires et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Nanopore-Based Identification of Individual Nucleotides for Direct RNA Sequencing

(2013) Mariam Ayub et al.   NANO LETTERS

Self-Assembled DNA Nanopores That Span Lipid Bilayers

(2013) Jonathan R. Burns et al.   NANO LETTERS

Nanopore Integrated Nanogaps for DNA Detection

(2013) Axel Fanget et al.   NANO LETTERS

Pressure-Controlled Motion of Single Polymers through Solid-State Nanopores

(2013) Bo Lu et al.   NANO LETTERS

Solid-state and biological nanopore for real-time sensing of single chemical and sequencing of DNA

(2013) Farzin Haque et al.   Nano Today

Electron beam induced local crystallization of HfO2 nanopores for biosensing applications

(2013) Jiwook Shim et al.   Nanoscale

An electro-hydrodynamics-based model for the ionic conductivity of solid-state nanopores during DNA translocation

(2013) Binquan Luan et al.   NANOTECHNOLOGY

Protein nanopores to detect DNA methylation

(2013) Natalie de Souza   NATURE METHODS

DNA sequencing using electrical conductance measurements of a DNA polymerase

(2013) Yu-Shiun Chen et al.   Nature Nanotechnology

Detecting the translocation of DNA through a nanopore using graphene nanoribbons

(2013) F. Traversi et al.   Nature Nanotechnology

Detection and mapping of 5-methylcytosine and 5-hydroxymethylcytosine with nanopore MspA

(2013) A. H. Laszlo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Error rates for nanopore discrimination among cytosine, methylcytosine, and hydroxymethylcytosine along individual DNA strands

(2013) J. Schreiber et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Slowing Down DNA Translocation Through Solid-State Nanopores by Pressure

(2013) Hengbin Zhang et al.   Small

Tailoring the hydrophobicity of graphene for its use as nanopores for DNA translocation

(2013) Grégory F. Schneider et al.   Nature Communications

Transport properties of two finite armchair graphene nanoribbons

(2013) Luis Rosales et al.   Nanoscale Research Letters

Nanometer-thin solid-state nanopores by cold ion beam sculpting

(2012) Aaron T. Kuan et al.   APPLIED PHYSICS LETTERS

Double-functionalized nanopore-embedded gold electrodes for rapid DNA sequencing

(2012) Biswarup Pathak et al.   APPLIED PHYSICS LETTERS

Synthesis, Physicochemical Properties, and Hydrogen Bonding of 4(5)-Substituted 1-H-Imidazole-2-carboxamide, a Potential Universal Reader for DNA Sequencing by Recognition Tunneling

(2012) Feng Liang et al.   CHEMISTRY-A EUROPEAN JOURNAL

Slowing down DNA Translocation through a Nanopore in Lithium Chloride

(2012) Stefan W. Kowalczyk et al.   NANO LETTERS

Oxford Nanopore announcement sets sequencing sector abuzz

(2012) Michael Eisenstein   NATURE BIOTECHNOLOGY

Automated forward and reverse ratcheting of DNA in a nanopore at 5-Å precision

(2012) Gerald M Cherf et al.   NATURE BIOTECHNOLOGY

DNA sequencing – spanning the generations

(2012) Steven McGinn et al.   New Biotechnology

Synthetic Lipid Membrane Channels Formed by Designed DNA Nanostructures

(2012) M. Langecker et al.   SCIENCE

Theoretical study on key factors in DNA sequencing with graphene nanopores

(2012) Lijun Liang et al.   RSC Advances

Nanopore-Based Single-Molecule Mass Spectrometry on a Lipid Membrane Microarray

(2011) Gerhard Baaken et al.   ACS Nano

Controlling molecular transport through nanopores

(2011) U. F. Keyser   Journal of the Royal Society Interface

Controlled Translocation of Individual DNA Molecules through Protein Nanopores with Engineered Molecular Brakes

(2011) Marcela Rincon-Restrepo et al.   NANO LETTERS

DNA Base-Specific Modulation of Microampere Transverse Edge Currents through a Metallic Graphene Nanoribbon with a Nanopore

(2011) Kamal K. Saha et al.   NANO LETTERS

Fast DNA sequencing with a graphene-based nanochannel device

(2011) Seung Kyu Min et al.   Nature Nanotechnology

Local electrical potential detection of DNA by nanowire–nanopore sensors

(2011) Ping Xie et al.   Nature Nanotechnology

Probing Access Resistance of Solid-State Nanopores with a Scanning-Probe Microscope Tip

(2011) Changbae Hyun et al.   Small

Single-molecule sensing electrode embedded in-plane nanopore

(2011) Makusu Tsutsui et al.   Scientific Reports

DNA Sensing Using Nanocrystalline Surface-Enhanced Al2O3Nanopore Sensors

(2010) Bala Murali Venkatesan et al.   ADVANCED FUNCTIONAL MATERIALS

Probing DNA with micro- and nanocapillaries and optical tweezers

(2010) L J Steinbock et al.   JOURNAL OF PHYSICS-CONDENSED MATTER

Processive Replication of Single DNA Molecules in a Nanopore Catalyzed by phi29 DNA Polymerase

(2010) Kate R. Lieberman et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Multiplexed Parallel Single Transport Recordings on Nanopore Arrays

(2010) Alexander Kleefen et al.   NANO LETTERS

Detecting DNA Folding with Nanocapillaries

(2010) Lorenz J. Steinbock et al.   NANO LETTERS

DNA Translocation through Graphene Nanopores

(2010) Christopher A. Merchant et al.   NANO LETTERS

DNA Translocation through Graphene Nanopores

(2010) Grégory F. Schneider et al.   NANO LETTERS

Optical Recognition of Converted DNA Nucleotides for Single-Molecule DNA Sequencing Using Nanopore Arrays

(2010) Ben McNally et al.   NANO LETTERS

Controlled Growth of Ordered Nanopore Arrays in GaN

(2010) Isaac H. Wildeson et al.   NANO LETTERS

DNA Tunneling Detector Embedded in a Nanopore

(2010) Aleksandar P. Ivanov et al.   NANO LETTERS

Graphene as a subnanometre trans-electrode membrane

(2010) S. Garaj et al.   NATURE

Identifying single bases in a DNA oligomer with electron tunnelling

(2010) Shuo Huang et al.   Nature Nanotechnology

Hybrid pore formation by directed insertion of α-haemolysin into solid-state nanopores

(2010) Adam R. Hall et al.   Nature Nanotechnology

Identifying single nucleotides by tunnelling current

(2010) Makusu Tsutsui et al.   Nature Nanotechnology

Rapid electronic detection of probe-specific microRNAs using thin nanopore sensors

(2010) Meni Wanunu et al.   Nature Nanotechnology

Replication of individual DNA molecules under electronic control using a protein nanopore

(2010) Felix Olasagasti et al.   Nature Nanotechnology

Helix-Coil Kinetics of Individual Polyadenylic Acid Molecules in a Protein Channel

(2010) Jianxun Lin et al.   PHYSICAL REVIEW LETTERS

Base-By-Base Ratcheting of Single Stranded DNA through a Solid-State Nanopore

(2010) Binquan Luan et al.   PHYSICAL REVIEW LETTERS

Nanopore DNA sequencing with MspA

(2010) I. M. Derrington et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Discrimination of Single Base Substitutions in a DNA Strand Immobilized in a Biological Nanopore

(2009) Robert F. Purnell et al.   ACS Nano

Highly Sensitive, Mechanically Stable Nanopore Sensors for DNA Analysis

(2009) Bala Murali Venkatesan et al.   ADVANCED MATERIALS

Specific Nucleotide Binding and Rebinding to Individual DNA Polymerase Complexes Captured on a Nanopore

(2009) Nicholas Hurt et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Distinguishing Single- and Double-Stranded Nucleic Acid Molecules Using Solid-State Nanopores

(2009) Gary M. Skinner et al.   NANO LETTERS

Detection of Local Protein Structures along DNA Using Solid-State Nanopores

(2009) Stefan W. Kowalczyk et al.   NANO LETTERS

Reverse DNA translocation through a solid-state nanopore by magnetic tweezers

(2009) Hongbo Peng et al.   NANOTECHNOLOGY

Low-frequency noise in solid-state nanopores

(2009) R M M Smeets et al.   NANOTECHNOLOGY

Translocation of double-stranded DNA through membrane-adapted phi29 motor protein nanopores

(2009) David Wendell et al.   Nature Nanotechnology

Electrostatic focusing of unlabelled DNA into nanoscale pores using a salt gradient

(2009) Meni Wanunu et al.   Nature Nanotechnology

Continuous base identification for single-molecule nanopore DNA sequencing

(2009) James Clarke et al.   Nature Nanotechnology

Origin of the electrophoretic force on DNA in solid-state nanopores

(2009) Stijn van Dorp et al.   Nature Physics

Single-nucleotide discrimination in immobilized DNA oligonucleotides with a biological nanopore

(2009) D. Stoddart et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Single-Molecule Nanopore Device Detects DNA Polymerase Activity with Single-Nucleotide Resolution

(2008) Scott L. Cockroft et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Single-molecule DNA detection with an engineered MspA protein nanopore

(2008) T. Z. Butler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Noise in solid-state nanopores

(2008) R. M. M. Smeets et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA