Expansion of Cultured Bacterial Diversity by Large-Scale Dilution-to-Extinction Culturing from a Single Seawater Sample

Carbohydrate Catabolism in Phaeobacter inhibens DSM 17395, a Member of the Marine Roseobacter Clade

(2014) Katharina Wiegmann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genomic differentiation among two strains of the PS1 clade isolated from geographically separated marine habitats

(2014) Francy Jimenez-Infante et al.   FEMS MICROBIOLOGY ECOLOGY

Evolutionary origin of a streamlined marine bacterioplankton lineage

(2014) Haiwei Luo   ISME Journal

Application of Diffusion Growth Chambers for the Cultivation of Marine Sponge-Associated Bacteria

(2014) Georg Steinert et al.   MARINE BIOTECHNOLOGY

Isolation of Microorganisms Using Sub-Micrometer Constrictions

(2014) Nil Tandogan et al.   PLoS One

Methane production by phosphate-starved SAR11 chemoheterotrophic marine bacteria

(2014) Paul Carini et al.   Nature Communications

Taxonomy and evolution of bacteriochlorophyll a-containing members of the OM60/NOR5 clade of marine gammaproteobacteria: description of Luminiphilus syltensis gen. nov., sp. nov., reclassification of Haliea rubra as Pseudohaliea rubra gen. nov., comb. nov., and emendation of Chromatocurvus halotolerans

(2013) Stefan Spring et al.   BMC MICROBIOLOGY

Stabilizing the foundation of the house that ‘omics builds: the evolving value of cultured isolates to marine microbiology

(2013) Michael S Rappé   CURRENT OPINION IN MICROBIOLOGY

Pathways and substrate-specific regulation of amino acid degradation inPhaeobacter inhibens DSM 17395 (archetype of the marineRoseobacterclade)

(2013) Katharina Drüppel et al.   ENVIRONMENTAL MICROBIOLOGY

Impact of a phytoplankton bloom on the diversity of the active bacterial community in the southern North Sea as revealed by metatranscriptomic approaches

(2013) Bernd Wemheuer et al.   FEMS MICROBIOLOGY ECOLOGY

Ecology of marine Bacteroidetes: a comparative genomics approach

(2013) Beatriz Fernández-Gómez et al.   ISME Journal

Bacterial taxa-area and distance-decay relationships in marine environments

(2013) L. Zinger et al.   MOLECULAR ECOLOGY

Abundant SAR11 viruses in the ocean

(2013) Yanlin Zhao et al.   NATURE

Comparative and Phylogenomic Evidence That the Alphaproteobacterium HIMB59 Is Not a Member of the Oceanic SAR11 Clade

(2013) Johan Viklund et al.   PLoS One

Genome of a SAR116 bacteriophage shows the prevalence of this phage type in the oceans

(2013) I. Kang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean

(2013) B. K. Swan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Basin-scale patterns in the abundance of SAR11 subclades, marine Actinobacteria (OM1), members of the Roseobacter clade and OCS116 in the South Atlantic

(2012) Robert M. Morris et al.   ENVIRONMENTAL MICROBIOLOGY

Tracking differential incorporation of dissolved organic carbon types among diverse lineages of Sargasso Sea bacterioplankton

(2012) Craig E. Nelson et al.   ENVIRONMENTAL MICROBIOLOGY

Ecological structuring of bacterial and archaeal taxa in surface ocean waters

(2012) Pelin Yilmaz et al.   FEMS MICROBIOLOGY ECOLOGY

Lentisphaera marina sp. nov., and emended description of the genus Lentisphaera

(2012) A. Choi et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Isolation of an aerobic sulfur oxidizer from the SUP05/Arctic96BD-19 clade

(2012) Katharine T Marshall et al.   ISME Journal

Global distribution and diversity of marine Verrucomicrobia

(2012) Sara Freitas et al.   ISME Journal

Expression patterns reveal niche diversification in a marine microbial assemblage

(2012) Scott M Gifford et al.   ISME Journal

Genome Sequence of Strain IMCC14465, Isolated from the East Sea, Belonging to the PS1 Clade of Alphaproteobacteria

(2012) S.-J. Yang et al.   JOURNAL OF BACTERIOLOGY

Genome Sequence of Strain HIMB55, a Novel Marine Gammaproteobacterium of the OM60/NOR5 Clade

(2012) M. J. Huggett et al.   JOURNAL OF BACTERIOLOGY

Capturing Single Cell Genomes of Active Polysaccharide Degraders: An Unexpected Contribution of Verrucomicrobia

(2012) Manuel Martinez-Garcia et al.   PLoS One

Seasonality in Ocean Microbial Communities

(2012) S. J. Giovannoni et al.   SCIENCE

Synthesis of Methylphosphonic Acid by Marine Microbes: A Source for Methane in the Aerobic Ocean

(2012) W. W. Metcalf et al.   SCIENCE

Untangling Genomes from Metagenomes: Revealing an Uncultured Class of Marine Euryarchaeota

(2012) V. Iverson et al.   SCIENCE

Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom

(2012) H. Teeling et al.   SCIENCE

Streamlining and Core Genome Conservation among Highly Divergent Members of the SAR11 Clade

(2012) J. Grote et al.   mBio

Draft genome sequence of strain HIMB100, a cultured representative of the SAR116 clade of marine Alphaproteobacteria

(2012) Jana Grote et al.   Standards in Genomic Sciences

Genome sequence of strain HIMB624, a cultured representative from the OM43 clade of marine Betaproteobacteria

(2012) Megan J. Huggett et al.   Standards in Genomic Sciences

Synergistic metabolism of a broad range of C1 compounds in the marine methylotrophic bacterium HTCC2181

(2011) Kimberly H. Halsey et al.   ENVIRONMENTAL MICROBIOLOGY

Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species

(2011) O.-S. Kim et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Genome Sequence of Strain IMCC3088, a Proteorhodopsin-Containing Marine Bacterium Belonging to the OM60/NOR5 Clade

(2011) Y. Jang et al.   JOURNAL OF BACTERIOLOGY

Genome Sequence of Strain IMCC2047, a Novel Marine Member of the Gammaproteobacteria

(2011) I. Kang et al.   JOURNAL OF BACTERIOLOGY

Genome Sequence of "Pedosphaera parvula" Ellin514, an Aerobic Verrucomicrobial Isolate from Pasture Soil

(2011) R. Kant et al.   JOURNAL OF BACTERIOLOGY

Distinct bacterial groups contribute to carbon cycling during a naturally iron fertilized phytoplankton bloom in the Southern Ocean

(2011) Ingrid Obernosterer et al.   LIMNOLOGY AND OCEANOGRAPHY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Reducing the Effects of PCR Amplification and Sequencing Artifacts on 16S rRNA-Based Studies

(2011) Patrick D. Schloss et al.   PLoS One

Phylogenomic evidence for a common ancestor of mitochondria and the SAR11 clade

(2011) J. Cameron Thrash et al.   Scientific Reports

Use of Ichip for High-Throughput In Situ Cultivation of "Uncultivable" Microbial Species

(2010) D. Nichols et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Environmental proteomics of microbial plankton in a highly productive coastal upwelling system

(2010) Sarah M Sowell et al.   ISME Journal

Genome characteristics of a generalist marine bacterial lineage

(2010) Ryan J Newton et al.   ISME Journal

Complete Genome Sequence of "Candidatus Puniceispirillum marinum" IMCC1322, a Representative of the SAR116 Clade in the Alphaproteobacteria

(2010) H.-M. Oh et al.   JOURNAL OF BACTERIOLOGY

Genomic and functional adaptation in surface ocean planktonic prokaryotes

(2010) Shibu Yooseph et al.   NATURE

Hollow-Fiber Membrane Chamber as a Device for In Situ Environmental Cultivation

(2009) Y. Aoi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Improved culturability of SAR11 strains in dilution-to-extinction culturing from the East Sea, West Pacific Ocean

(2009) Jaeho Song et al.   FEMS MICROBIOLOGY LETTERS

Seasonality and vertical structure of microbial communities in an ocean gyre

(2009) Alexander H Treusch et al.   ISME Journal

Biogeography and phylogeny of the NOR5/OM60 clade of Gammaproteobacteria

(2009) Shi Yan et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

The small genome of an abundant coastal ocean methylotroph

(2008) Stephen J. Giovannoni et al.   ENVIRONMENTAL MICROBIOLOGY

Phylogenetic analyses of ribosomal DNA-containing bacterioplankton genome fragments from a 4000 m vertical profile in the North Pacific Subtropical Gyre

(2008) Vinh D. Pham et al.   ENVIRONMENTAL MICROBIOLOGY

Aerobic production of methane in the sea

(2008) David M. Karl et al.   Nature Geoscience

NCBI BLAST: a better web interface

(2008) M. Johnson et al.   NUCLEIC ACIDS RESEARCH