An integrated targeted metabolomic platform for high-throughput metabolite profiling and automated data processing

Syndrome PENS (papular epidermal nevus with “skyline” basal cell layer)

(2015) C. Pernet et al.   ANNALES DE DERMATOLOGIE ET DE VENEREOLOGIE

MRMPROBS suite for metabolomics using large-scale MRM assays

(2014) Hiroshi Tsugawa et al.   BIOINFORMATICS

MRMPROBS: A Data Assessment and Metabolite Identification Tool for Large-Scale Multiple Reaction Monitoring Based Widely Targeted Metabolomics

(2013) Hiroshi Tsugawa et al.   ANALYTICAL CHEMISTRY

Metabolite turns master regulator

(2013) Joshua D. Rabinowitz et al.   NATURE

Liquid chromatography quadrupole time-of-flight mass spectrometry characterization of metabolites guided by the METLIN database

(2013) Zheng-Jiang Zhu et al.   Nature Protocols

Metabolomics of Human Cerebrospinal Fluid Identifies Signatures of Malignant Glioma

(2012) Jason W. Locasale et al.   MOLECULAR & CELLULAR PROTEOMICS

An accelerated workflow for untargeted metabolomics using the METLIN database

(2012) Ralf Tautenhahn et al.   NATURE BIOTECHNOLOGY

A positive/negative ion–switching, targeted mass spectrometry–based metabolomics platform for bodily fluids, cells, and fresh and fixed tissue

(2012) Min Yuan et al.   Nature Protocols

Metabolomics: the apogee of the omics trilogy

(2012) Gary J. Patti et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Untargeted Plasma Metabolite Profiling Reveals the Broad Systemic Consequences of Xanthine Oxidoreductase Inactivation in Mice

(2012) Qiuying Chen et al.   PLoS One

MMSAT: Automated Quantification of Metabolites in Selected Reaction Monitoring Experiments

(2011) Jason W. H. Wong et al.   ANALYTICAL CHEMISTRY

Highly Sensitive GC/MS/MS Method for Quantitation of Amino and Nonamino Organic Acids

(2011) Hans F. N. Kvitvang et al.   ANALYTICAL CHEMISTRY

mProphet: automated data processing and statistical validation for large-scale SRM experiments

(2011) Lukas Reiter et al.   NATURE METHODS

Web-based inference of biological patterns, functions and pathways from metabolomic data using MetaboAnalyst

(2011) Jianguo Xia et al.   Nature Protocols

High-Throughput and Multiplexed LC/MS/MRM Method for Targeted Metabolomics

(2010) Ru Wei et al.   ANALYTICAL CHEMISTRY

Ultrahigh Performance Liquid Chromatography−Tandem Mass Spectrometry Method for Fast and Robust Quantification of Anionic and Aromatic Metabolites

(2010) Joerg Martin Buescher et al.   ANALYTICAL CHEMISTRY

metaXCMS: Second-Order Analysis of Untargeted Metabolomics Data

(2010) Ralf Tautenhahn et al.   ANALYTICAL CHEMISTRY

Skyline: an open source document editor for creating and analyzing targeted proteomics experiments

(2010) Brendan MacLean et al.   BIOINFORMATICS

MassBank: a public repository for sharing mass spectral data for life sciences

(2010) Hisayuki Horai et al.   JOURNAL OF MASS SPECTROMETRY

MetAlign: Interface-Driven, Versatile Metabolomics Tool for Hyphenated Full-Scan Mass Spectrometry Data Preprocessing

(2009) Arjen Lommen   ANALYTICAL CHEMISTRY

MetaboAnalyst: a web server for metabolomic data analysis and interpretation

(2009) J. Xia et al.   NUCLEIC ACIDS RESEARCH

A screening method for the simultaneous detection of glucocorticoids, diuretics, stimulants, anti-oestrogens, beta-adrenergic drugs and anabolic steroids in human urine by LC-ESI-MS/MS

(2008) Monica Mazzarino et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Highly sensitive feature detection for high resolution LC/MS

(2008) Ralf Tautenhahn et al.   BMC BIOINFORMATICS

Systems biology: Metabonomics

(2008) Jeremy K. Nicholson et al.   NATURE