Gaussian graphical model for identifying significantly responsive regulatory networks from time course high-throughput data

Coexpression network analysis in chronic hepatitis B and C hepatic lesions reveals distinct patterns of disease progression to hepatocellular carcinoma

(2012) Danning He et al.   Journal of Molecular Cell Biology

Inferring gene regulatory networks from gene expression data by path consistency algorithm based on conditional mutual information

(2011) Xiujun Zhang et al.   BIOINFORMATICS

Network screening of Goto-Kakizaki rat liver microarray data during diabetic progression

(2011) Huarong Zhou et al.   BMC Systems Biology

Light-dark oscillations in the lung transcriptome: implications for lung homeostasis, repair, metabolism, disease, and drug action

(2011) Siddharth Sukumaran et al.   JOURNAL OF APPLIED PHYSIOLOGY

Identifying disease genes and module biomarkers by differential interactions

(2011) Xiaoping Liu et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Identifying dysfunctional crosstalk of pathways in various regions of Alzheimer's disease brains

(2010) Zhi-Ping Liu et al.   BMC Systems Biology

Circadian variations in gene expression in rat abdominal adipose tissue and relationship to physiology

(2010) Siddharth Sukumaran et al.   PHYSIOLOGICAL GENOMICS

A Network Biology Study on Circadian Rhythm by Integrating Various Omics Data

(2009) Yong Wang et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

A novel signaling pathway impact analysis

(2008) Adi Laurentiu Tarca et al.   BIOINFORMATICS

Network evaluation from the consistency of the graph structure with the measured data

(2008) Shigeru Saito et al.   BMC Systems Biology

Uncovering signal transduction networks from high-throughput data by integer linear programming

(2008) Xing-Ming Zhao et al.   NUCLEIC ACIDS RESEARCH