4.6 Article

Noise Effects in Various Quantitative Susceptibility Mapping Methods

Journal

IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING
Volume 60, Issue 12, Pages 3441-3448

Publisher

IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC
DOI: 10.1109/TBME.2013.2266795

Keywords

Bayesian; noise weighting; quantitative susceptibility mapping (QSM); structure prior

Funding

  1. National Institutes of Health [R01 NS072370, R01 EB013443]

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Various regularization methods have been proposed for single-orientation quantitative susceptibility mapping (QSM), which is an ill-posed magnetic field to susceptibility source inverse problem. Noise amplification, a major issue in inverse problems, manifests as streaking artifacts and quantification errors in QSM and has not been comparatively evaluated in these algorithms. In this paper, various QSM methods were systematically categorized for noise analysis. Six representative QSM methods were selected from four categories: two non-Bayesian methods with alteration or approximation of the dipole kernel to overcome the ill conditioning; four Bayesian methods using a general mathematical prior or a specific physical structure prior to select a unique solution, and using a data fidelity term with or without noise weighting. The effects of noise in these QSM methods were evaluated by reconstruction errors in simulation and image quality in 50 consecutive human subjects. Bayesian QSM methods with noise weighting consistently reduced root mean squared errors in numerical simulations and increased image quality scores in the human brain images, when compared to non-Bayesian methods and to corresponding Bayesian methods without noise weighting (p <= 0.001). In summary, noise effects in QSM can be reduced using Bayesian methods with proper noise weighting.

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