标题
Retrotransposon targeting to RNA polymerase III-transcribed genes
作者
关键词
Retrotransposon, <em class=EmphasisTypeItalic >S. cerevisiae</em>, Ty element, RNA polymerase III, tRNA, Integrase
出版物
Mobile DNA
Volume 9, Issue 1, Pages -
出版商
Springer Nature
发表日期
2018-04-23
DOI
10.1186/s13100-018-0119-2
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- The yeast Ty1 retrotransposon requires components of the nuclear pore complex for transcription and genomic integration
- (2018) Savrina Manhas et al. NUCLEIC ACIDS RESEARCH
- Molecular mechanism of promoter opening by RNA polymerase III
- (2018) Matthias K. Vorländer et al. NATURE
- Integration site selection by retroviruses and transposable elements in eukaryotes
- (2017) Tania Sultana et al. NATURE REVIEWS GENETICS
- Cryo-EM structures and atomic model of the HIV-1 strand transfer complex intasome
- (2017) Dario Oliveira Passos et al. SCIENCE
- A supramolecular assembly mediates lentiviral DNA integration
- (2017) Allison Ballandras-Colas et al. SCIENCE
- Emerging Insights into the Roles of the Paf1 Complex in Gene Regulation
- (2017) S. Branden Van Oss et al. TRENDS IN BIOCHEMICAL SCIENCES
- Dissecting Nucleosome Function with a Comprehensive Histone H2A and H2B Mutant Library
- (2017) Shuangying Jiang et al. G3-Genes Genomes Genetics
- Retrotransposon Domestication and Control in Dictyostelium discoideum
- (2017) Marek Malicki et al. Frontiers in Microbiology
- TRE5-A retrotransposition profiling reveals putative RNA polymerase III transcription complex binding sites on the Dictyostelium extrachromosomal rDNA element
- (2017) Thomas Spaller et al. PLoS One
- Transcription by RNA polymerase III: insights into mechanism and regulation
- (2016) Tomasz W. Turowski et al. BIOCHEMICAL SOCIETY TRANSACTIONS
- Ty1 Integrase Interacts with RNA Polymerase III-specific Subcomplexes to Promote Insertion of Ty1 Elements Upstream of Polymerase (Pol) III-transcribed Genes
- (2016) Stephanie Cheung et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Decoding the principles underlying the frequency of association with nucleoli for RNA polymerase III–transcribed genes in budding yeast
- (2016) Praveen Belagal et al. MOLECULAR BIOLOGY OF THE CELL
- Crystal structure of the Rous sarcoma virus intasome
- (2016) Zhiqi Yin et al. NATURE
- Cryo-EM reveals a novel octameric integrase structure for betaretroviral intasome function
- (2016) Allison Ballandras-Colas et al. NATURE
- Convergent evolution of tRNA gene targeting preferences in compact genomes
- (2016) Thomas Spaller et al. Mobile DNA
- Sequence Assembly of Yarrowia lipolytica Strain W29/CLIB89 Shows Transposable Element Diversity
- (2016) Christophe Magnan et al. PLoS One
- A self-encoded capsid derivative restricts Ty1 retrotransposition in Saccharomyces
- (2015) David J. Garfinkel et al. CURRENT GENETICS
- Genomic Insights into the Saccharomyces sensu stricto Complex
- (2015) Anthony R. Borneman et al. GENETICS
- Structural basis for retroviral integration into nucleosomes
- (2015) Daniel P. Maskell et al. NATURE
- Nuclear architecture dictates HIV-1 integration site selection
- (2015) Bruna Marini et al. NATURE
- The yeast genome undergoes significant topological reorganization in quiescence
- (2015) Mark T. Rutledge et al. NUCLEIC ACIDS RESEARCH
- An RNA polymerase III subunit determines sites of retrotransposon integration
- (2015) A. Bridier-Nahmias et al. SCIENCE
- Perinuclear tethers license telomeric DSBs for a broad kinesin- and NPC-dependent DNA repair process
- (2015) Daniel K.C. Chung et al. Nature Communications
- Architecture of TFIIIC and its role in RNA polymerase III pre-initiation complex assembly
- (2015) Gary Male et al. Nature Communications
- Chromatin organization at the nuclear pore favours HIV replication
- (2015) Mickaël Lelek et al. Nature Communications
- A Role for the Budding Yeast Separase, Esp1, in Ty1 Element Retrotransposition
- (2015) Krystina L. Ho et al. PLoS Genetics
- Genomic Insights into the Saccharomyces sensu stricto Complex
- (2015) Anthony R. Borneman et al. GENETICS
- A long terminal repeat retrotransposon of Schizosaccharomyces japonicus integrates upstream of RNA pol III transcribed genes
- (2015) Yabin Guo et al. Mobile DNA
- Histone-modifying enzymes, histone modifications and histone chaperones in nucleosome assembly: Lessons learned from Rtt109 histone acetyltransferases
- (2014) Jayme L. Dahlin et al. CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY
- Coordination of tRNA transcription with export at nuclear pore complexes in budding yeast
- (2014) M. Chen et al. GENES & DEVELOPMENT
- Dyskerin, tRNA genes, and condensin tether pericentric chromatin to the spindle axis in mitosis
- (2014) Chloe E. Snider et al. JOURNAL OF CELL BIOLOGY
- Genome-wide high-resolution mapping of chromosome fragile sites in Saccharomyces cerevisiae
- (2014) W. Song et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The structure and retrotransposition mechanism of LTR-retrotransposons in the asexual yeastCandida albicans
- (2014) Lulu Zhang et al. Virulence
- Genome-Wide Profiling of Yeast DNA:RNA Hybrid Prone Sites with DRIP-Chip
- (2014) Yujia A. Chan et al. PLoS Genetics
- Genome-Wide Distribution of RNA-DNA Hybrids Identifies RNase H Targets in tRNA Genes, Retrotransposons and Mitochondria
- (2014) Aziz El Hage et al. PLoS Genetics
- A unique nucleosome arrangement, maintained actively by chromatin remodelers facilitates transcription of yeast tRNA genes
- (2013) Yatendra Kumar et al. BMC GENOMICS
- Systematic characterization of the conformation and dynamics of budding yeast chromosome XII
- (2013) Benjamin Albert et al. JOURNAL OF CELL BIOLOGY
- Balancing chromatin remodeling and histone modifications in transcription
- (2013) Emily Petty et al. TRENDS IN GENETICS
- Active Transposition in Genomes
- (2012) Cheng Ran Lisa Huang et al. Annual Review of Genetics
- Yeast RNA polymerase III transcription factors and effectors
- (2012) Joël Acker et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- The many roles of the conserved eukaryotic Paf1 complex in regulating transcription, histone modifications, and disease states
- (2012) Brett N. Tomson et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Genome Rearrangements Caused by Depletion of Essential DNA Replication Proteins in Saccharomyces cerevisiae
- (2012) E. Cheng et al. GENETICS
- Retrotransposon Ty1 integration targets specifically positioned asymmetric nucleosomal DNA segments in tRNA hotspots
- (2012) L. Mularoni et al. GENOME RESEARCH
- Retrotransposon profiling of RNA polymerase III initiation sites
- (2012) X. Qi et al. GENOME RESEARCH
- A nucleosomal surface defines an integration hotspot for the Saccharomyces cerevisiae Ty1 retrotransposon
- (2012) J. A. Baller et al. GENOME RESEARCH
- In VitroTargeting of Strand Transfer by the Ty3 Retroelement Integrase
- (2012) Xiaojie Qi et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- A map of nucleosome positions in yeast at base-pair resolution
- (2012) Kristin Brogaard et al. NATURE
- Evolutionary Genomics of Transposable Elements in Saccharomyces cerevisiae
- (2012) Martin Carr et al. PLoS One
- Two large-scale analyses of Ty1 LTR-retrotransposon de novo insertion events indicate that Ty1 targets nucleosomal DNA near the H2A/H2B interface
- (2012) Antoine Bridier-Nahmias et al. Mobile DNA
- Transposable elements in yeasts
- (2011) Claudine Bleykasten-Grosshans et al. COMPTES RENDUS BIOLOGIES
- Genetically tagged TRE5-A retrotransposons reveal high amplification rates and authentic target site preference in the Dictyostelium discoideum genome
- (2011) O. Siol et al. NUCLEIC ACIDS RESEARCH
- tRNA Gene Identity Affects Nuclear Positioning
- (2011) Chris D. M. Rodley et al. PLoS One
- Microbe domestication and the identification of the wild genetic stock of lager-brewing yeast
- (2011) D. Libkind et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Retrotransposition is associated with genome instability during chronological aging
- (2011) P. H. Maxwell et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Comparative Functional Genomics of the Fission Yeasts
- (2011) N. Rhind et al. SCIENCE
- The Awesome Power of Yeast Evolutionary Genetics: New Genome Sequences and Strain Resources for the Saccharomyces sensu stricto Genus
- (2011) Devin R. Scannell et al. G3-Genes Genomes Genetics
- The Paf1 complex: Platform or player in RNA polymerase II transcription?
- (2010) Judith A. Jaehning Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- A three-dimensional model of the yeast genome
- (2010) Zhijun Duan et al. NATURE
- Retroviral intasome assembly and inhibition of DNA strand transfer
- (2010) Stephen Hare et al. NATURE
- The mechanism of retroviral integration from X-ray structures of its key intermediates
- (2010) Goedele N. Maertens et al. NATURE
- Competitive Repair by Naturally Dispersed Repetitive DNA during Non-Allelic Homologous Recombination
- (2010) Margaret L. Hoang et al. PLoS Genetics
- Experimental annotation of the human pathogen Candida albicans coding and noncoding transcribed regions using high-resolution tiling arrays
- (2010) Adnane Sellam et al. GENOME BIOLOGY
- Global identification of yeast chromosome interactions using Genome conformation capture
- (2009) C.D.M. Rodley et al. FUNGAL GENETICS AND BIOLOGY
- Chromosome Aberrations Resulting From Double-Strand DNA Breaks at a Naturally Occurring Yeast Fragile Site Composed of Inverted Ty Elements Are Independent of Mre11p and Sae2p
- (2009) A. M. Casper et al. GENETICS
- Population genomics of domestic and wild yeasts
- (2009) Gianni Liti et al. NATURE
- Centromere sequence and dynamics in Dictyostelium discoideum
- (2009) Gernot Glöckner et al. NUCLEIC ACIDS RESEARCH
- Retrotransposon overdose and genome integrity
- (2009) L. Z. Scheifele et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Structure of Eukaryotic RNA Polymerases
- (2008) P. Cramer et al. Annual Review of Biophysics
- Clustering of yeast tRNA genes is mediated by specific association of condensin with tRNA gene transcription complexes
- (2008) R. A. Haeusler et al. GENES & DEVELOPMENT
- Identification of cis-acting sites for condensin loading onto budding yeast chromosomes
- (2008) C. D'Ambrosio et al. GENES & DEVELOPMENT
- Chromatin-Associated Genes Protect the Yeast Genome From Ty1 Insertional Mutagenesis
- (2008) Katherine M. Nyswaner et al. GENETICS
- Chromodomains direct integration of retrotransposons to heterochromatin
- (2008) X. Gao et al. GENOME RESEARCH
- A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome
- (2008) T. N. Mavrich et al. GENOME RESEARCH
- HIV-1 Pre-Integration Complexes Selectively Target Decondensed Chromatin in the Nuclear Periphery
- (2008) Alberto Albanese et al. PLoS One
- Double-strand breaks associated with repetitive DNA can reshape the genome
- (2008) J. L. Argueso et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now