Convergent evolution of tRNA gene targeting preferences in compact genomes

How retrotransposons shape genome regulation

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Ty1 Integrase Interacts with RNA Polymerase III-specific Subcomplexes to Promote Insertion of Ty1 Elements Upstream of Polymerase (Pol) III-transcribed Genes

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MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genetic control of morphogenesis in Dictyostelium

(2015) William F. Loomis   DEVELOPMENTAL BIOLOGY

The Evolution of Aggregative Multicellularity and Cell–Cell Communication in the Dictyostelia

(2015) Qingyou Du et al.   JOURNAL OF MOLECULAR BIOLOGY

An RNA polymerase III subunit determines sites of retrotransposon integration

(2015) A. Bridier-Nahmias et al.   SCIENCE

Architecture of TFIIIC and its role in RNA polymerase III pre-initiation complex assembly

(2015) Gary Male et al.   Nature Communications

CDD: NCBI's conserved domain database

(2014) Aron Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

Transfer RNA Post-Transcriptional Processing, Turnover, and Subcellular Dynamics in the YeastSaccharomyces cerevisiae

(2013) Anita K. Hopper   GENETICS

Analysis of phenotypic evolution in Dictyostelia highlights developmental plasticity as a likely consequence of colonial multicellularity

(2013) M. Romeralo et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Comparative genomics in the Amoebozoa clade

(2012) Gernot Glöckner et al.   BIOLOGICAL REVIEWS

Retrotransposon Ty1 integration targets specifically positioned asymmetric nucleosomal DNA segments in tRNA hotspots

(2012) L. Mularoni et al.   GENOME RESEARCH

Retrotransposon profiling of RNA polymerase III initiation sites

(2012) X. Qi et al.   GENOME RESEARCH

A nucleosomal surface defines an integration hotspot for the Saccharomyces cerevisiae Ty1 retrotransposon

(2012) J. A. Baller et al.   GENOME RESEARCH

In VitroTargeting of Strand Transfer by the Ty3 Retroelement Integrase

(2012) Xiaojie Qi et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

dictyBase 2013: integrating multiple Dictyostelid species

(2012) Siddhartha Basu et al.   NUCLEIC ACIDS RESEARCH

Epigenetic virtues of chromodomains

(2011) Bartlomiej J. Blus et al.   CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY

Phylogeny-wide analysis of social amoeba genomes highlights ancient origins for complex intercellular communication

(2011) A. J. Heidel et al.   GENOME RESEARCH

Dynamic interactions between transposable elements and their hosts

(2011) Henry L. Levin et al.   NATURE REVIEWS GENETICS

Comparative genomics of the social amoebae Dictyostelium discoideum and Dictyostelium purpureum

(2011) Richard Sucgang et al.   GENOME BIOLOGY

Plant centromeric retrotransposons: a structural and cytogenetic perspective

(2011) Pavel Neumann et al.   Mobile DNA

Dynamics of a novel centromeric histone variant CenH3 reveals the evolutionary ancestral timing of centromere biogenesis

(2010) Manu Dubin et al.   NUCLEIC ACIDS RESEARCH

The impact of retrotransposons on human genome evolution

(2009) Richard Cordaux et al.   NATURE REVIEWS GENETICS

Centromere sequence and dynamics in Dictyostelium discoideum

(2009) Gernot Glöckner et al.   NUCLEIC ACIDS RESEARCH

Eumycetozoa = Amoebozoa?: SSUrDNA Phylogeny of Protosteloid Slime Molds and Its Significance for the Amoebozoan Supergroup

(2009) Lora L. Shadwick et al.   PLoS One

Chromodomains direct integration of retrotransposons to heterochromatin

(2008) X. Gao et al.   GENOME RESEARCH

A single amino acid substitution in ORF1 dramatically decreases L1 retrotransposition and provides insight into nucleic acid chaperone activity

(2008) S. L. Martin et al.   NUCLEIC ACIDS RESEARCH