标题
The evolution of posttranscriptional regulation
作者
关键词
-
出版物
Wiley Interdisciplinary Reviews-RNA
Volume -, Issue -, Pages e1485
出版商
Wiley
发表日期
2018-05-31
DOI
10.1002/wrna.1485
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- PolyA_DB 3 catalogs cleavage and polyadenylation sites identified by deep sequencing in multiple genomes
- (2017) Ruijia Wang et al. NUCLEIC ACIDS RESEARCH
- In silico analysis of the sequence features responsible for alternatively spliced introns in the model green alga Chlamydomonas reinhardtii
- (2017) Praveen-Kumar Raj-Kumar et al. PLANT MOLECULAR BIOLOGY
- The Relationship between Alternative Splicing and Proteomic Complexity
- (2017) Benjamin J. Blencowe TRENDS IN BIOCHEMICAL SCIENCES
- Most Alternative Isoforms Are Not Functionally Important
- (2017) Michael L. Tress et al. TRENDS IN BIOCHEMICAL SCIENCES
- Alternative Splicing May Not Be the Key to Proteome Complexity
- (2017) Michael L. Tress et al. TRENDS IN BIOCHEMICAL SCIENCES
- Mobile Group II Introns as Ancestral Eukaryotic Elements
- (2017) Olga Novikova et al. TRENDS IN GENETICS
- Interplay of cis and trans mechanisms driving transcription factor binding and gene expression evolution
- (2017) Emily S. Wong et al. Nature Communications
- Plant microRNAs in larval food regulate honeybee caste development
- (2017) Kegan Zhu et al. PLoS Genetics
- The evolutionary origin of plant and animal microRNAs
- (2017) Yehu Moran et al. Nature Ecology & Evolution
- Group II Intron Self-Splicing
- (2016) Anna Marie Pyle Annual Review of Biophysics
- On the Dependency of Cellular Protein Levels on mRNA Abundance
- (2016) Yansheng Liu et al. CELL
- Control of Candida albicans morphology and pathogenicity by post-transcriptional mechanisms
- (2016) David Kadosh CELLULAR AND MOLECULAR LIFE SCIENCES
- Post-transcriptional gene regulation in the biology and virulence ofCandida albicans
- (2016) Jiyoti Verma-Gaur et al. CELLULAR MICROBIOLOGY
- Gene regulation and speciation in house mice
- (2016) Katya L. Mack et al. GENOME RESEARCH
- A comprehensive analysis of 3′ end sequencing data sets reveals novel polyadenylation signals and the repressive role of heterogeneous ribonucleoprotein C on cleavage and polyadenylation
- (2016) Andreas J. Gruber et al. GENOME RESEARCH
- Is Genome Complexity a Consequence of Inefficient Selection? Evidence from Intron Creation in Nonrecombining Regions
- (2016) Scott W. Roy MOLECULAR BIOLOGY AND EVOLUTION
- Global analysis of regulatory divergence in the evolution of mouse alternative polyadenylation
- (2016) Mei‐Sheng Xiao et al. Molecular Systems Biology
- Alternative splicing and the evolution of phenotypic novelty
- (2016) Stephen J. Bush et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- RNA splicing is a primary link between genetic variation and disease
- (2016) Yang I. Li et al. SCIENCE
- MicroRNAs in Honey Bee Caste Determination
- (2016) Regan Ashby et al. Scientific Reports
- Evolution of Gene Regulation during Transcription and Translation
- (2015) Zhe Wang et al. Genome Biology and Evolution
- Integrative analysis of RNA, translation, and protein levels reveals distinct regulatory variation across humans
- (2015) Can Cenik et al. GENOME RESEARCH
- Why Selection Might Be Stronger When Populations Are Small: Intron Size and Density Predict within and between-Species Usage of Exonic Splice Associatedcis-Motifs
- (2015) XianMing Wu et al. MOLECULAR BIOLOGY AND EVOLUTION
- Next-generation analysis of gene expression regulation – comparing the roles of synthesis and degradation
- (2015) Joel McManus et al. Molecular BioSystems
- TheWOR15′ untranslated region regulates white-opaque switching inCandida albicansby reducing translational efficiency
- (2015) Zhiyun Guan et al. MOLECULAR MICROBIOLOGY
- Extensive allele-specific translational regulation in hybrid mice
- (2015) J. Hou et al. Molecular Systems Biology
- Predominant contribution of cis-regulatory divergence in the evolution of mouse alternative splicing
- (2015) Q. Gao et al. Molecular Systems Biology
- Alternative 3′ UTRs act as scaffolds to regulate membrane protein localization
- (2015) Binyamin D. Berkovits et al. NATURE
- Towards a molecular understanding of microRNA-mediated gene silencing
- (2015) Stefanie Jonas et al. NATURE REVIEWS GENETICS
- microRNAs and the evolution of complex multicellularity: identification of a large, diverse complement of microRNAs in the brown algaEctocarpus
- (2015) James E. Tarver et al. NUCLEIC ACIDS RESEARCH
- Genomic signatures of evolutionary transitions from solitary to group living
- (2015) K. M. Kapheim et al. SCIENCE
- The human transcriptome across tissues and individuals
- (2015) M. Mele et al. SCIENCE
- Developmental Transcriptome for a Facultatively Eusocial Bee, Megalopta genalis
- (2015) Beryl M. Jones et al. G3-Genes Genomes Genetics
- Integration of Posttranscriptional Gene Networks into Metabolic Adaptation and Biofilm Maturation in Candida albicans
- (2015) Jiyoti Verma-Gaur et al. PLoS Genetics
- Genome-wide analysis of alternative splicing in Volvox carteri
- (2015) Arash Kianianmomeni et al. BMC GENOMICS
- Building Robust Transcriptomes with Master Splicing Factors
- (2014) Mohini Jangi et al. CELL
- CPSF30 and Wdr33 directly bind to AAUAAA in mammalian mRNA 3′ processing
- (2014) Serena L. Chan et al. GENES & DEVELOPMENT
- Reconstitution of CPSF active in polyadenylation: recognition of the polyadenylation signal by WDR33
- (2014) Lars Schönemann et al. GENES & DEVELOPMENT
- Heritable variation of mRNA decay rates in yeast
- (2014) Jennifer M. Andrie et al. GENOME RESEARCH
- Evolution of splicing regulatory networks in Drosophila
- (2014) C. J. McManus et al. GENOME RESEARCH
- Extensive and coordinated control of allele-specific expression by both transcription and translation in Candida albicans
- (2014) D. Muzzey et al. GENOME RESEARCH
- Cnidarian microRNAs frequently regulate targets by cleavage
- (2014) Y. Moran et al. GENOME RESEARCH
- Widespread intron retention in mammals functionally tunes transcriptomes
- (2014) Ulrich Braunschweig et al. GENOME RESEARCH
- Correcting for Differential Transcript Coverage Reveals a Strong Relationship between Alternative Splicing and Organism Complexity
- (2014) Lu Chen et al. MOLECULAR BIOLOGY AND EVOLUTION
- InCandida albicanshyphae, Sec2p is physically associated withSEC2mRNA on secretory vesicles
- (2014) David Caballero-Lima et al. MOLECULAR MICROBIOLOGY
- A 5′ UTR-mediated translational efficiency mechanism inhibits theCandida albicansmorphological transition
- (2014) Delma S. Childers et al. MOLECULAR MICROBIOLOGY
- CFIm25 links alternative polyadenylation to glioblastoma tumour suppression
- (2014) Chioniso P. Masamha et al. NATURE
- Evolutionary dynamics of coding and non-coding transcriptomes
- (2014) Anamaria Necsulea et al. NATURE REVIEWS GENETICS
- Context-dependent control of alternative splicing by RNA-binding proteins
- (2014) Xiang-Dong Fu et al. NATURE REVIEWS GENETICS
- APASdb: a database describing alternative poly(A) sites and selection of heterogeneous cleavage sites downstream of poly(A) signals
- (2014) Leiming You et al. NUCLEIC ACIDS RESEARCH
- A critical appraisal of the use of microRNA data in phylogenetics
- (2014) R. C. Thomson et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Of social molecules: The interactive assembly ofASH1mRNA-transport complexes in yeast
- (2014) Annika Niedner et al. RNA Biology
- Impact of regulatory variation from RNA to protein
- (2014) A. Battle et al. SCIENCE
- Transcriptome Sequencing from Diverse Human Populations Reveals Differentiated Regulatory Architecture
- (2014) Alicia R. Martin et al. PLoS Genetics
- Genetic Influences on Translation in Yeast
- (2014) Frank W. Albert et al. PLoS Genetics
- The fate of the messenger is pre-determined: A new model for regulation of gene expression
- (2013) Gal Haimovich et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- RNA decay machines: Deadenylation by the Ccr4–Not and Pan2–Pan3 complexes
- (2013) Elmar Wahle et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- RNA decay mechanisms: Specificity through diversity
- (2013) Georg Stoecklin et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- A meta-analysis of the genomic and transcriptomic composition of complex life
- (2013) Gangiang Liu et al. CELL CYCLE
- Fungal Alternative Splicing is Associated with Multicellular Complexity and Virulence: A Genome-Wide Multi-Species Study
- (2013) K. Grutzmann et al. DNA RESEARCH
- Ubiquitously transcribed genes use alternative polyadenylation to achieve tissue-specific expression
- (2013) S. Lianoglou et al. GENES & DEVELOPMENT
- Evidence for Deep Phylogenetic Conservation of Exonic Splice-Related Constraints: Splice-Related Skews at Exonic Ends in the Brown Alga Ectocarpus Are Common and Resemble Those Seen in Humans
- (2013) XianMing Wu et al. Genome Biology and Evolution
- Ribosome profiling reveals post-transcriptional buffering of divergent gene expression in yeast
- (2013) C. J. McManus et al. GENOME RESEARCH
- Evolution at two levels of gene expression in yeast
- (2013) C. G. Artieri et al. GENOME RESEARCH
- Integrative phenomics reveals insight into the structure of phenotypic diversity in budding yeast
- (2013) D. A. Skelly et al. GENOME RESEARCH
- Eukaryotic mRNA Decay: Methodologies, Pathways, and Links to Other Stages of Gene Expression
- (2013) José E. Pérez-Ortín et al. JOURNAL OF MOLECULAR BIOLOGY
- Substantial Loss of Conserved and Gain of Novel MicroRNA Families in Flatworms
- (2013) Bastian Fromm et al. MOLECULAR BIOLOGY AND EVOLUTION
- Inheritance of Gene Expression Level and Selective Constraints on Trans- and Cis-Regulatory Changes in Yeast
- (2013) Bernhard Schaefke et al. MOLECULAR BIOLOGY AND EVOLUTION
- RNA catalyses nuclear pre-mRNA splicing
- (2013) Sebastian M. Fica et al. NATURE
- Variation and genetic control of protein abundance in humans
- (2013) Linfeng Wu et al. NATURE
- Transcriptome and genome sequencing uncovers functional variation in humans
- (2013) Tuuli Lappalainen et al. NATURE
- Alternative cleavage and polyadenylation: extent, regulation and function
- (2013) Ran Elkon et al. NATURE REVIEWS GENETICS
- Recipe for a Busy Bee: MicroRNAs in Honey Bee Caste Determination
- (2013) Xiangqian Guo et al. PLoS One
- Primate Transcript and Protein Expression Levels Evolve Under Compensatory Selection Pressures
- (2013) Z. Khan et al. SCIENCE
- Alternative cleavage and polyadenylation: the long and short of it
- (2013) Bin Tian et al. TRENDS IN BIOCHEMICAL SCIENCES
- Do miRNAs have a deep evolutionary history?
- (2012) James E. Tarver et al. BIOESSAYS
- Function of alternative splicing
- (2012) Olga Kelemen et al. GENE
- Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
- (2012) J. K. Greenberg et al. GENES BRAIN AND BEHAVIOR
- Extensive alternative polyadenylation during zebrafish development
- (2012) I. Ulitsky et al. GENOME RESEARCH
- Extensive compensatory cis-trans regulation in the evolution of mouse gene expression
- (2012) A. Goncalves et al. GENOME RESEARCH
- A quantitative atlas of polyadenylation in five mammals
- (2012) Adnan Derti et al. GENOME RESEARCH
- Transcriptome survey reveals increased complexity of the alternative splicing landscape inArabidopsis
- (2012) Yamile Marquez et al. GENOME RESEARCH
- Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
- (2012) F. Liu et al. INSECT MOLECULAR BIOLOGY
- BRG1 and NRG1 form a novel feedback circuit regulating Candida albicans hypha formation and virulence
- (2012) Ian A. Cleary et al. MOLECULAR MICROBIOLOGY
- Analysis of alternative cleavage and polyadenylation by 3′ region extraction and deep sequencing
- (2012) Mainul Hoque et al. NATURE METHODS
- Transcriptome-wide analyses of CstF64-RNA interactions in global regulation of mRNA alternative polyadenylation
- (2012) C. Yao et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cotranscriptional splicing efficiency differs dramatically between Drosophila and mouse
- (2012) Y. L. Khodor et al. RNA
- Splicing in 4D
- (2012) P. Papasaikas et al. SCIENCE
- Evolutionary Dynamics of Gene and Isoform Regulation in Mammalian Tissues
- (2012) J. Merkin et al. SCIENCE
- The Evolutionary Landscape of Alternative Splicing in Vertebrate Species
- (2012) N. L. Barbosa-Morais et al. SCIENCE
- Global Patterns of Tissue-Specific Alternative Polyadenylation in Drosophila
- (2012) Peter Smibert et al. Cell Reports
- The Contribution of RNA Decay Quantitative Trait Loci to Inter-Individual Variation in Steady-State Gene Expression Levels
- (2012) Athma A. Pai et al. PLoS Genetics
- Extensive Evolutionary Changes in Regulatory Element Activity during Human Origins Are Associated with Altered Gene Expression and Positive Selection
- (2012) Yoichiro Shibata et al. PLoS Genetics
- Whence genes in pieces: reconstruction of the exon-intron gene structures of the last eukaryotic common ancestor and other ancestral eukaryotes
- (2012) Eugene V. Koonin et al. Wiley Interdisciplinary Reviews-RNA
- Widespread promoter-mediated coordination of transcription and mRNA degradation
- (2012) Mally Dori-Bachash et al. GENOME BIOLOGY
- The sufficient minimal set of miRNA seed types
- (2011) Daniel C. Ellwanger et al. BIOINFORMATICS
- Bayesian prediction of tissue-regulated splicing using RNA sequence and cellular context
- (2011) Hui Yuan Xiong et al. BIOINFORMATICS
- Ending the message: poly(A) signals then and now
- (2011) N. J. Proudfoot GENES & DEVELOPMENT
- Functional consequences of developmentally regulated alternative splicing
- (2011) Auinash Kalsotra et al. NATURE REVIEWS GENETICS
- Evolution and Functional Diversification ofMIRNAGenes
- (2011) Josh T. Cuperus et al. PLANT CELL
- Two types of cis-trans compensation in the evolution of transcriptional regulation
- (2011) K. R. Takahasi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Coupled Evolution of Transcription and mRNA Degradation
- (2011) Mally Dori-Bachash et al. PLOS BIOLOGY
- Comparative Analysis of Proteome and Transcriptome Variation in Mouse
- (2011) Anatole Ghazalpour et al. PLoS Genetics
- Vive la différence: biogenesis and evolution of microRNAs in plants and animals
- (2011) Michael J Axtell et al. GENOME BIOLOGY
- Genome-wide analysis of alternative splicing in Chlamydomonas reinhardtii
- (2010) Adam Labadorf et al. BMC GENOMICS
- Global Genetic Robustness of the Alternative Splicing Machinery in Caenorhabditis elegans
- (2010) Yang Li et al. GENETICS
- Regulatory divergence in Drosophila revealed by mRNA-seq
- (2010) C. J. McManus et al. GENOME RESEARCH
- Natural selection on cis and trans regulation in yeasts
- (2010) J. J. Emerson et al. GENOME RESEARCH
- Evolution of alternative splicing in primate brain transcriptomes
- (2010) Lan Lin et al. HUMAN MOLECULAR GENETICS
- Next-generation small RNA sequencing for microRNAs profiling in the honey beeApis mellifera
- (2010) X. Chen et al. INSECT MOLECULAR BIOLOGY
- Proteomic analysis of hyphae-specific proteins that are expressed differentially in cakem1/cakem1 mutant strains of Candida albicans
- (2010) Kang-Hoon Lee et al. JOURNAL OF MICROBIOLOGY
- Translational Regulation of Gene Expression during Conditions of Cell Stress
- (2010) Keith A. Spriggs et al. MOLECULAR CELL
- Genome-wide analysis of alternative splicing evolution amongMussubspecies
- (2010) BETTINA HARR et al. MOLECULAR ECOLOGY
- Cell wall integrity is linked to mitochondria and phospholipid homeostasis in Candida albicans through the activity of the post-transcriptional regulator Ccr4-Pop2
- (2010) Michael J. Dagley et al. MOLECULAR MICROBIOLOGY
- Deciphering the splicing code
- (2010) Yoseph Barash et al. NATURE
- Formation, regulation and evolution of Caenorhabditis elegans 3′UTRs
- (2010) Calvin H. Jan et al. NATURE
- Expansion of the eukaryotic proteome by alternative splicing
- (2010) Timothy W. Nilsen et al. NATURE
- Alternative splicing and evolution: diversification, exon definition and function
- (2010) Hadas Keren et al. NATURE REVIEWS GENETICS
- Molecular mechanisms of eukaryotic pre-mRNA 3′ end processing regulation
- (2010) Stefania Millevoi et al. NUCLEIC ACIDS RESEARCH
- The genetic basis of evolutionary change in gene expression levels
- (2010) J. J. Emerson et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- MicroRNA Gene Evolution inArabidopsis lyrataandArabidopsis thaliana
- (2010) Noah Fahlgren et al. PLANT CELL
- Distinct 3'UTRs differentially regulate activity-dependent translation of brain-derived neurotrophic factor (BDNF)
- (2010) A. G. Lau et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Group II Introns: Mobile Ribozymes that Invade DNA
- (2010) A. M. Lambowitz et al. Cold Spring Harbor Perspectives in Biology
- Did Genetic Drift Drive Increases in Genome Complexity?
- (2010) Kenneth D. Whitney et al. PLoS Genetics
- MicroRNAs and metazoan macroevolution: insights into canalization, complexity, and the Cambrian explosion
- (2009) Kevin J. Peterson et al. BIOESSAYS
- Regulation of Translation Initiation in Eukaryotes: Mechanisms and Biological Targets
- (2009) Nahum Sonenberg et al. CELL
- MicroRNAs: Target Recognition and Regulatory Functions
- (2009) David P. Bartel CELL
- The Spliceosome: Design Principles of a Dynamic RNP Machine
- (2009) Markus C. Wahl et al. CELL
- Effective population size and patterns of molecular evolution and variation
- (2009) Brian Charlesworth NATURE REVIEWS GENETICS
- Compartmentalized function through cell differentiation in filamentous cyanobacteria
- (2009) Enrique Flores et al. NATURE REVIEWS MICROBIOLOGY
- Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches
- (2009) Mo Chen et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- A Yeast Hybrid Provides Insight into the Evolution of Gene Expression Regulation
- (2009) I. Tirosh et al. SCIENCE
- Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling
- (2009) N. T. Ingolia et al. SCIENCE
- An RNA Transport System in Candida albicans Regulates Hyphal Morphology and Invasive Growth
- (2009) Sarah L. Elson et al. PLoS Genetics
- Malin: maximum likelihood analysis of intron evolution in eukaryotes
- (2008) M. Csuros BIOINFORMATICS
- Distinct Role of Long 3′ UTR BDNF mRNA in Spine Morphology and Synaptic Plasticity in Hippocampal Neurons
- (2008) Juan Ji An et al. CELL
- Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
- (2008) Andrew Grimson et al. NATURE
- Regulatory changes underlying expression differences within and between Drosophila species
- (2008) Patricia J Wittkopp et al. NATURE GENETICS
- Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing
- (2008) Qun Pan et al. NATURE GENETICS
- Phylogenetic analysis of mRNA polyadenylation sites reveals a role of transposable elements in evolution of the 3′-end of genes
- (2008) Ju Youn Lee et al. NUCLEIC ACIDS RESEARCH
- Splicing regulation: From a parts list of regulatory elements to an integrated splicing code
- (2008) Z. Wang et al. RNA
- Origins and evolution of eukaryotic RNA interference
- (2008) S SHABALINA et al. TRENDS IN ECOLOGY & EVOLUTION
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreDiscover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversation