Global metabolic interaction network of the human gut microbiota for context-specific community-scale analysis
出版年份 2017 全文链接
标题
Global metabolic interaction network of the human gut microbiota for context-specific community-scale analysis
作者
关键词
-
出版物
Nature Communications
Volume 8, Issue -, Pages 15393
出版商
Springer Nature
发表日期
2017-06-06
DOI
10.1038/ncomms15393
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- From Dietary Fiber to Host Physiology: Short-Chain Fatty Acids as Key Bacterial Metabolites
- (2016) Ara Koh et al. CELL
- Generation of genome-scale metabolic reconstructions for 773 members of the human gut microbiota
- (2016) Stefanía Magnúsdóttir et al. NATURE BIOTECHNOLOGY
- KEGG: new perspectives on genomes, pathways, diseases and drugs
- (2016) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- On the Origins and Control of Community Types in the Human Microbiome
- (2016) Travis E. Gibson et al. PLoS Computational Biology
- Intestinal Short Chain Fatty Acids and their Link with Diet and Human Health
- (2016) David Ríos-Covián et al. Frontiers in Microbiology
- Quantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome
- (2015) Saeed Shoaie et al. Cell Metabolism
- Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota
- (2015) Kristoffer Forslund et al. NATURE
- MetaPhlAn2 for enhanced metagenomic taxonomic profiling
- (2015) Duy Tin Truong et al. NATURE METHODS
- Metabolic dependencies drive species co-occurrence in diverse microbial communities
- (2015) Aleksej Zelezniak et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Harnessing the landscape of microbial culture media to predict new organism–media pairings
- (2015) Matthew A. Oberhardt et al. Nature Communications
- Microbiota-Generated Metabolites Promote Metabolic Benefits via Gut-Brain Neural Circuits
- (2014) Filipe De Vadder et al. CELL
- The Treatment-Naive Microbiome in New-Onset Crohn’s Disease
- (2014) Dirk Gevers et al. Cell Host & Microbe
- Modelling the emergent dynamics and major metabolites of the human colonic microbiota
- (2014) Helen Kettle et al. ENVIRONMENTAL MICROBIOLOGY
- Correlation Between Intraluminal Oxygen Gradient and Radial Partitioning of Intestinal Microbiota
- (2014) Lindsey Albenberg et al. GASTROENTEROLOGY
- Precision microbiome reconstitution restores bile acid mediated resistance to Clostridium difficile
- (2014) Charlie G. Buffie et al. NATURE
- The gut microbiota, bacterial metabolites and colorectal cancer
- (2014) Petra Louis et al. NATURE REVIEWS MICROBIOLOGY
- Gene-targeted microfluidic cultivation validated by isolation of a gut bacterium listed in Human Microbiome Project's Most Wanted taxa
- (2014) Liang Ma et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cultivation-based multiplex phenotyping of human gut microbiota allows targeted recovery of previously uncultured bacteria
- (2014) Elizabeth A. Rettedal et al. Nature Communications
- Metabolic Resource Allocation in Individual Microbes Determines Ecosystem Interactions and Spatial Dynamics
- (2014) William R. Harcombe et al. Cell Reports
- Emergent Biosynthetic Capacity in Simple Microbial Communities
- (2014) Hsuan-Chao Chiu et al. PLoS Computational Biology
- The role of short-chain fatty acids in the interplay between diet, gut microbiota, and host energy metabolism
- (2013) Gijs den Besten et al. JOURNAL OF LIPID RESEARCH
- Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells
- (2013) Yukihiro Furusawa et al. NATURE
- Metabolites produced by commensal bacteria promote peripheral regulatory T-cell generation
- (2013) Nicholas Arpaia et al. NATURE
- Diet rapidly and reproducibly alters the human gut microbiome
- (2013) Lawrence A. David et al. NATURE
- Gut metagenome in European women with normal, impaired and diabetic glucose control
- (2013) Fredrik H. Karlsson et al. NATURE
- A community-driven global reconstruction of human metabolism
- (2013) Ines Thiele et al. NATURE BIOTECHNOLOGY
- Metabolic modeling of species interaction in the human microbiome elucidates community-level assembly rules
- (2013) R. Levy et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity
- (2013) A. Everard et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Sex Differences in the Gut Microbiome Drive Hormone-Dependent Regulation of Autoimmunity
- (2013) J. G. M. Markle et al. SCIENCE
- Feedback between Population and Evolutionary Dynamics Determines the Fate of Social Microbial Populations
- (2013) Alvaro Sanchez et al. PLOS BIOLOGY
- Ecological Modeling from Time-Series Inference: Insight into Dynamics and Stability of Intestinal Microbiota
- (2013) Richard R. Stein et al. PLoS Computational Biology
- Lateral gene transfer of an ABC transporter complex between major constituents of the human gut microbiome
- (2012) Conor J Meehan et al. BMC MICROBIOLOGY
- The gut anaerobe Faecalibacterium prausnitzii uses an extracellular electron shuttle to grow at oxic–anoxic interphases
- (2012) M Tanweer Khan et al. ISME Journal
- Anti-diabetic effects of lactic acid bacteria in normal and type 2 diabetic mice
- (2012) Kayoko Honda et al. JOURNAL OF CLINICAL BIOCHEMISTRY AND NUTRITION
- A metagenome-wide association study of gut microbiota in type 2 diabetes
- (2012) Junjie Qin et al. NATURE
- Metagenomic microbial community profiling using unique clade-specific marker genes
- (2012) Nicola Segata et al. NATURE METHODS
- Butyrate and Propionate Protect against Diet-Induced Obesity and Regulate Gut Hormones via Free Fatty Acid Receptor 3-Independent Mechanisms
- (2012) Hua V. Lin et al. PLoS One
- Gut inflammation can boost horizontal gene transfer between pathogenic and commensal Enterobacteriaceae
- (2012) B. Stecher et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Tackling the Microbiome
- (2012) L. Hood SCIENCE
- Microbial Co-occurrence Relationships in the Human Microbiome
- (2012) Karoline Faust et al. PLoS Computational Biology
- Inferring Dynamic Signatures of Microbes in Complex Host Ecosystems
- (2012) Georg K. Gerber et al. PLoS Computational Biology
- Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome
- (2012) Sahar Abubucker et al. PLoS Computational Biology
- Inferring Correlation Networks from Genomic Survey Data
- (2012) Jonathan Friedman et al. PLoS Computational Biology
- Fecal microbiota transplantation in relapsing Clostridium difficile infection
- (2012) Faith Rohlke et al. Therapeutic Advances in Gastroenterology
- The Microbiome and Butyrate Regulate Energy Metabolism and Autophagy in the Mammalian Colon
- (2011) Dallas R. Donohoe et al. Cell Metabolism
- Treating Clostridium difficile Infection With Fecal Microbiota Transplantation
- (2011) Johan S. Bakken et al. Clinical Gastroenterology and Hepatology
- Responses of Gut Microbiota and Glucose and Lipid Metabolism to Prebiotics in Genetic Obese and Diet-Induced Leptin-Resistant Mice
- (2011) Amandine Everard et al. DIABETES
- Genomic analysis identifies association of Fusobacterium with colorectal carcinoma
- (2011) A. D. Kostic et al. GENOME RESEARCH
- Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease
- (2011) S. Greenblum et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes
- (2011) G. D. Wu et al. SCIENCE
- Competitive and cooperative metabolic interactions in bacterial communities
- (2011) Shiri Freilich et al. Nature Communications
- A human gut microbial gene catalogue established by metagenomic sequencing
- (2010) Junjie Qin et al. NATURE
- Network medicine: a network-based approach to human disease
- (2010) Albert-László Barabási et al. NATURE REVIEWS GENETICS
- Butyrate Improves Insulin Sensitivity and Increases Energy Expenditure in Mice
- (2009) Z. Gao et al. DIABETES
- A core gut microbiome in obese and lean twins
- (2008) Peter J. Turnbaugh et al. NATURE
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