Gene-targeted microfluidic cultivation validated by isolation of a gut bacterium listed in Human Microbiome Project's Most Wanted taxa

Individually addressable arrays of replica microbial cultures enabled by splitting SlipChips

(2014) Liang Ma et al.   Integrative Biology

Fecal Microbiome and Volatile Organic Compound Metabolome in Obese Humans With Nonalcoholic Fatty Liver Disease

(2013) Maitreyi Raman et al.   Clinical Gastroenterology and Hepatology

A genomic update on clostridial phylogeny: Gram-negative spore formers and other misplaced clostridia

(2013) Natalya Yutin et al.   ENVIRONMENTAL MICROBIOLOGY

Cell Extract-Containing Medium for Culture of Intracellular Fastidious Bacteria

(2013) S. Singh et al.   JOURNAL OF CLINICAL MICROBIOLOGY

A microfluidic device for dry sample preservation in remote settings

(2013) Stefano Begolo et al.   LAB ON A CHIP

Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice

(2013) V. K. Ridaura et al.   SCIENCE

Natural Product Biosynthetic Gene Diversity in Geographically Distinct Soil Microbiomes

(2012) Boojala Vijay B. Reddy et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Growing Unculturable Bacteria

(2012) E. J. Stewart   JOURNAL OF BACTERIOLOGY

Gut microbiota composition correlates with diet and health in the elderly

(2012) Marcus J. Claesson et al.   NATURE

Increased Gut Permeability and Microbiota Change Associate with Mesenteric Fat Inflammation and Metabolic Dysfunction in Diet-Induced Obese Mice

(2012) Yan Y. Lam et al.   PLoS One

The “Most Wanted” Taxa from the Human Microbiome for Whole Genome Sequencing

(2012) Anthony A. Fodor et al.   PLoS One

Functional metagenomic strategies for the discovery of novel enzymes and biosurfactants with biotechnological applications from marine ecosystems

(2011) J. Kennedy et al.   JOURNAL OF APPLIED MICROBIOLOGY

Microdroplet-Enabled Highly Parallel Co-Cultivation of Microbial Communities

(2011) Jihyang Park et al.   PLoS One

Encapsulating Bacteria in Agarose Microparticles Using Microfluidics for High-Throughput Cell Analysis and Isolation

(2010) Ye-Jin Eun et al.   ACS Chemical Biology

SlipChip for Immunoassays in Nanoliter Volumes

(2010) Weishan Liu et al.   ANALYTICAL CHEMISTRY

Nanoliter Multiplex PCR Arrays on a SlipChip

(2010) Feng Shen et al.   ANALYTICAL CHEMISTRY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Microfluidic stochastic confinement enhances analysis of rare cells by isolating cells and creating high density environments for control of diffusible signals

(2010) Meghan E. Vincent et al.   CHEMICAL SOCIETY REVIEWS

Siderophores from Neighboring Organisms Promote the Growth of Uncultured Bacteria

(2010) Anthony D'Onofrio et al.   CHEMISTRY & BIOLOGY

Metabolism of Bile Salts in Mice Influences Spore Germination in Clostridium difficile

(2010) Jennifer L. Giel et al.   PLoS One

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

User-Loaded SlipChip for Equipment-Free Multiplexed Nanoliter-Scale Experiments

(2009) Liang Li et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Isolation, incubation, and parallel functional testing and identification by FISH of rare microbial single-copy cells from multi-species mixtures using the combination of chemistrode and stochastic confinement

(2009) Weishan Liu et al.   LAB ON A CHIP

SlipChip

(2009) Wenbin Du et al.   LAB ON A CHIP

Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques

(2008) Rudolf Amann et al.   NATURE REVIEWS MICROBIOLOGY