Long noncoding miRNA gene represses wheat β-diketone waxes

Genome-wide identification and functional prediction of novel and fungi-responsive lincRNAs in Triticum aestivum

(2016) Hong Zhang et al.   BMC GENOMICS

TheCer-cqugene cluster determines three key players in a β-diketone synthase polyketide pathway synthesizing aliphatics in epicuticular waxes

(2016) Lizette M Schneider et al.   JOURNAL OF EXPERIMENTAL BOTANY

Near-optimal probabilistic RNA-seq quantification

(2016) Nicolas L Bray et al.   NATURE BIOTECHNOLOGY

A Metabolic Gene Cluster in the WheatW1and the BarleyCer-cquLoci Determines β-Diketone Biosynthesis and Glaucousness

(2016) Shelly Hen-Avivi et al.   PLANT CELL

An integrative approach to identify hexaploid wheat miRNAome associated with development and tolerance to abiotic stress

(2015) Zahra Agharbaoui et al.   BMC GENOMICS

The landscape of long noncoding RNAs in the human transcriptome

(2015) Matthew K Iyer et al.   NATURE GENETICS

The expanding world of small RNAs in plants

(2015) Filipe Borges et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Tailor: a computational framework for detecting non-templated tailing of small silencing RNAs

(2015) Min-Te Chou et al.   NUCLEIC ACIDS RESEARCH

Rapid divergence and high diversity of miRNAs and miRNA targets in the Camelineae

(2015) Lisa M. Smith et al.   PLANT JOURNAL

Analysis of non-coding transcriptome in rice and maize uncovers roles of conserved lncRNAs associated with agriculture traits

(2015) Huan Wang et al.   PLANT JOURNAL

Comparative fine mapping of the Wax 1 (W1) locus in hexaploid wheat

(2015) Ping Lu et al.   THEORETICAL AND APPLIED GENETICS

Transgenerational inheritance or resetting of stress-induced epigenetic modifications: two sides of the same coin

(2015) Penny J. Tricker   Frontiers in Plant Science

Emerging roles of long non-coding RNA in root developmental plasticity and regulation of phosphate homeostasis

(2015) Jeremie Bazin et al.   Frontiers in Plant Science

A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome

(2015) Jarrod A Chapman et al.   GENOME BIOLOGY

Developmental Changes in Composition and Morphology of Cuticular Waxes on Leaves and Spikes of Glossy and Glaucous Wheat (Triticum aestivum L.)

(2015) Yong Wang et al.   PLoS One

Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)

(2014) Ran Han et al.   BMC GENOMICS

The cuticular wax inhibitor locus Iw2 in wild diploid wheat Aegilops tauschii: phenotypic survey, genetic analysis, and implications for the evolution of common wheat

(2014) Ryo Nishijima et al.   BMC PLANT BIOLOGY

Whole-genome discovery of miRNAs and their targets in wheat (Triticum aestivum L.)

(2014) Fenglong Sun et al.   BMC PLANT BIOLOGY

History and current status of wheat miRNAs using next-generation sequencing and their roles in development and stress

(2014) H. Budak et al.   Briefings in Functional Genomics

Genome-wide identification of long noncoding natural antisense transcripts and their responses to light in Arabidopsis

(2014) H. Wang et al.   GENOME RESEARCH

mRNA and Small RNA Transcriptomes Reveal Insights into Dynamic Homoeolog Regulation of Allopolyploid Heterosis in Nascent Hexaploid Wheat

(2014) A. Li et al.   PLANT CELL

Sequencing of Chloroplast Genomes from Wheat, Barley, Rye and Their Relatives Provides a Detailed Insight into the Evolution of the Triticeae Tribe

(2014) Christopher P. Middleton et al.   PLoS One

A Comprehensive Genome-Wide Study on Tissue-Specific and Abiotic Stress-Specific miRNAs in Triticum aestivum

(2014) Ritu Pandey et al.   PLoS One

Ancient hybridizations among the ancestral genomes of bread wheat

(2014) T. Marcussen et al.   SCIENCE

Evolutionary history of plant microRNAs

(2014) Richard S. Taylor et al.   TRENDS IN PLANT SCIENCE

Genome-wide discovery and characterization of maize long non-coding RNAs

(2014) Lin Li et al.   GENOME BIOLOGY

Development-associated microRNAs in grains of wheat (Triticum aestivum L.)

(2013) Fanrong Meng et al.   BMC PLANT BIOLOGY

Epigenetic regulation by long noncoding RNAs in plants

(2013) Jae Bok Heo et al.   CHROMOSOME RESEARCH

Multiple RNA recognition patterns during microRNA biogenesis in plants

(2013) N. G. Bologna et al.   GENOME RESEARCH

Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation

(2013) Jizeng Jia et al.   NATURE

Plant MicroRNAs Display Differential 3' Truncation and Tailing Modifications That Are ARGONAUTE1 Dependent and Conserved Across Species

(2013) J. Zhai et al.   PLANT CELL

TheInhibitor of wax 1locus (Iw1) prevents formation of β- and OH-β-diketones in wheat cuticular waxes and maps to a sub-cM interval on chromosome arm 2BS

(2013) Nikolai M. Adamski et al.   PLANT JOURNAL

Genetic Interactions Underlying the Biosynthesis and Inhibition of β-Diketones in Wheat and Their Impact on Glaucousness and Cuticle Permeability

(2013) Zhengzhi Zhang et al.   PLoS One

Comparative High-Resolution Mapping of the Wax Inhibitors Iw1 and Iw2 in Hexaploid Wheat

(2013) Haibin Wu et al.   PLoS One

Origins and Evolution of MicroRNA Genes in Plant Species

(2012) Masafumi Nozawa et al.   Genome Biology and Evolution

Characterization of statistical features for plant microRNA prediction

(2011) Vivek Thakur et al.   BMC GENOMICS

Identification and characterization of wheat long non-protein coding RNAs responsive to powdery mildew infection and heat stress by using microarray analysis and SBS sequencing

(2011) Mingming Xin et al.   BMC PLANT BIOLOGY

Gene silencing by microRNAs: contributions of translational repression and mRNA decay

(2011) Eric Huntzinger et al.   NATURE REVIEWS GENETICS

Evolution and Functional Diversification ofMIRNAGenes

(2011) Josh T. Cuperus et al.   PLANT CELL

Exploration of small non coding RNAs in wheat (Triticum aestivum L.)

(2011) Yingyin Yao et al.   PLANT MOLECULAR BIOLOGY

A High Throughput Barley Stripe Mosaic Virus Vector for Virus Induced Gene Silencing in Monocots and Dicots

(2011) Cheng Yuan et al.   PLoS One

MicroRNA Gene Evolution inArabidopsis lyrataandArabidopsis thaliana

(2010) Noah Fahlgren et al.   PLANT CELL

22-nucleotide RNAs trigger secondary siRNA biogenesis in plants

(2010) H.-M. Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Rate and Molecular Spectrum of Spontaneous Mutations in Arabidopsis thaliana

(2010) S. Ossowski et al.   SCIENCE

MicroRNAs: Target Recognition and Regulatory Functions

(2009) David P. Bartel   CELL

Small silencing RNAs: an expanding universe

(2009) Megha Ghildiyal et al.   NATURE REVIEWS GENETICS

Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses

(2008) B. Ben Amor et al.   GENOME RESEARCH

Acc homoeoloci and the evolution of wheat genomes

(2008) D. Chalupska et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolution of plant microRNAs and their targets

(2008) Michael J. Axtell et al.   TRENDS IN PLANT SCIENCE