cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination

Gctf: Real-time CTF determination and correction

(2016) Kai Zhang   JOURNAL OF STRUCTURAL BIOLOGY

EMPIAR: a public archive for raw electron microscopy image data

(2016) Andrii Iudin et al.   NATURE METHODS

Models for the a subunits of theThermus thermophilusV/A-ATPase andSaccharomyces cerevisiaeV-ATPase enzymes by cryo-EM and evolutionary covariance

(2016) Daniel G. Schep et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

2.3 A resolution cryo-EM structure of human p97 and mechanism of allosteric inhibition

(2016) S. Banerjee et al.   SCIENCE

The 3.8 A resolution cryo-EM structure of Zika virus

(2016) D. Sirohi et al.   SCIENCE

Ensemble cryo-EM uncovers inchworm-like translocation of a viral IRES through the ribosome

(2016) Priyanka D Abeyrathne et al.   eLife

Accelerated cryo-EM structure determination with parallelisation using GPUs in RELION-2

(2016) Dari Kimanius et al.   eLife

SubspaceEM: A fast maximum-a-posteriori algorithm for cryo-EM single particle reconstruction

(2015) Nicha C. Dvornek et al.   JOURNAL OF STRUCTURAL BIOLOGY

A statistical approach to the initial volume problem in Single Particle Analysis by Electron Microscopy

(2015) C.O.S. Sorzano et al.   JOURNAL OF STRUCTURAL BIOLOGY

Alignment of cryo-EM movies of individual particles by optimization of image translations

(2015) John L. Rubinstein et al.   JOURNAL OF STRUCTURAL BIOLOGY

Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase

(2015) Jianhua Zhao et al.   NATURE

Structure of a yeast spliceosome at 3.6-angstrom resolution

(2015) Chuangye Yan et al.   SCIENCE

Low cost, high performance processing of single particle cryo-electron microscopy data in the cloud

(2015) Michael A Cianfrocco et al.   eLife

Measuring the optimal exposure for single particle cryo-EM using a 2.6 Å reconstruction of rotavirus VP6

(2015) Timothy Grant et al.   eLife

Sampling the conformational space of the catalytic subunit of human γ-secretase

(2015) Xiao-chen Bai et al.   eLife

Single particle analysis integrated with microscopy: A high-throughput approach for reconstructing icosahedral particles

(2014) Xiaodong Yan et al.   JOURNAL OF STRUCTURAL BIOLOGY

Beyond blob-ology

(2014) M. T. J. Smith et al.   SCIENCE

The Resolution Revolution

(2014) W. Kuhlbrandt   SCIENCE

Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine

(2014) Wilson Wong et al.   eLife

Structure of the TRPV1 ion channel determined by electron cryo-microscopy

(2013) Maofu Liao et al.   NATURE

Avoiding the pitfalls of single particle cryo-electron microscopy: Einstein from noise

(2013) R. Henderson   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Validation of Cryo-EM Structure of IP3R1 Channel

(2013) Stephen C. Murray et al.   STRUCTURE

PRIME: Probabilistic Initial 3D Model Generation for Single-Particle Cryo-Electron Microscopy

(2013) Hans Elmlund et al.   STRUCTURE

High-resolution noise substitution to measure overfitting and validate resolution in 3D structure determination by single particle electron cryomicroscopy

(2013) Shaoxia Chen et al.   ULTRAMICROSCOPY

gEMpicker: a highly parallel GPU-accelerated particle picking tool for cryo-electron microscopy

(2013) Thai V Hoang et al.   BMC STRUCTURAL BIOLOGY

Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles

(2013) Xiao-chen Bai et al.   eLife

SIMPLE: Software for ab initio reconstruction of heterogeneous single-particles

(2012) Dominika Elmlund et al.   JOURNAL OF STRUCTURAL BIOLOGY

Prevention of overfitting in cryo-EM structure determination

(2012) Sjors H W Scheres et al.   NATURE METHODS

Outcome of the First Electron Microscopy Validation Task Force Meeting

(2012) Richard Henderson et al.   STRUCTURE

A Bayesian View on Cryo-EM Structure Determination

(2011) Sjors H.W. Scheres   JOURNAL OF MOLECULAR BIOLOGY

A Bayesian method for 3D macromolecular structure inference using class average images from single particle electron microscopy

(2010) Navdeep Jaitly et al.   BIOINFORMATICS