gEMpicker: a highly parallel GPU-accelerated particle picking tool for cryo-electron microscopy

Dynamo: A flexible, user-friendly development tool for subtomogram averaging of cryo-EM data in high-performance computing environments

(2012) Daniel Castaño-Díez et al.   JOURNAL OF STRUCTURAL BIOLOGY

Structural Analysis of Macromolecular Assemblies by Electron Microscopy

(2011) E. V. Orlova et al.   CHEMICAL REVIEWS

Reference-free particle selection enhanced with semi-supervised machine learning for cryo-electron microscopy

(2011) Robert Langlois et al.   JOURNAL OF STRUCTURAL BIOLOGY

Experimental evaluation of support vector machine-based and correlation-based approaches to automatic particle selection

(2011) Pablo Arbeláez et al.   JOURNAL OF STRUCTURAL BIOLOGY

A distributed multi-GPU system for high speed electron microscopic tomographic reconstruction

(2011) Shawn Q. Zheng et al.   ULTRAMICROSCOPY

Ultra-fast FFT protein docking on graphics processors

(2010) David W. Ritchie et al.   BIOINFORMATICS

GPU-enabled FREALIGN: Accelerating single particle 3D reconstruction and refinement in Fourier space on graphics processors

(2010) Xueming Li et al.   JOURNAL OF STRUCTURAL BIOLOGY

Automatic particle selection from electron micrographs using machine learning techniques

(2009) C.O.S. Sorzano et al.   JOURNAL OF STRUCTURAL BIOLOGY

DoG Picker and TiltPicker: Software tools to facilitate particle selection in single particle electron microscopy

(2009) N.R. Voss et al.   JOURNAL OF STRUCTURAL BIOLOGY