DNMT and HDAC inhibitors induce cryptic transcription start sites encoded in long terminal repeats
出版年份 2017 全文链接
标题
DNMT and HDAC inhibitors induce cryptic transcription start sites encoded in long terminal repeats
作者
关键词
-
出版物
NATURE GENETICS
Volume 49, Issue 7, Pages 1052-1060
出版商
Springer Nature
发表日期
2017-06-12
DOI
10.1038/ng.3889
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Combining Epigenetic and Immunotherapy to Combat Cancer
- (2016) Katherine B. Chiappinelli et al. CANCER RESEARCH
- 5-Azacytidine and DLI can induce long-term remissions in AML patients relapsed after allograft
- (2015) J Steinmann et al. BONE MARROW TRANSPLANTATION
- DNA-Demethylating Agents Target Colorectal Cancer Cells by Inducing Viral Mimicry by Endogenous Transcripts
- (2015) David Roulois et al. CELL
- Inhibiting DNA Methylation Causes an Interferon Response in Cancer via dsRNA Including Endogenous Retroviruses
- (2015) Katherine B. Chiappinelli et al. CELL
- Comprehensive identification of genes driven by ERV9-LTRs reveals TNFRSF10B as a re-activatable mediator of testicular cancer cell death
- (2015) U Beyer et al. CELL DEATH AND DIFFERENTIATION
- Dynamic Transcription of Distinct Classes of Endogenous Retroviral Elements Marks Specific Populations of Early Human Embryonic Cells
- (2015) Jonathan Göke et al. Cell Stem Cell
- CAGE profiling of ncRNAs in hepatocellular carcinoma reveals widespread activation of retroviral LTR promoters in virus-induced tumors
- (2015) Kosuke Hashimoto et al. GENOME RESEARCH
- Alternative transcription initiation leads to expression of a novel ALK isoform in cancer
- (2015) Thomas Wiesner et al. NATURE
- Epigenetic silencing of TH1-type chemokines shapes tumour immunity and immunotherapy
- (2015) Dongjun Peng et al. NATURE
- StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
- (2015) Mihaela Pertea et al. NATURE BIOTECHNOLOGY
- The landscape of long noncoding RNAs in the human transcriptome
- (2015) Matthew K Iyer et al. NATURE GENETICS
- Epigenetic activation of a cryptic TBC1D16 transcript enhances melanoma progression by targeting EGFR
- (2015) Miguel Vizoso et al. NATURE MEDICINE
- HISAT: a fast spliced aligner with low memory requirements
- (2015) Daehwan Kim et al. NATURE METHODS
- CAGEr: precise TSS data retrieval and high-resolution promoterome mining for integrative analyses
- (2015) Vanja Haberle et al. NUCLEIC ACIDS RESEARCH
- TSGene 2.0: an updated literature-based knowledgebase for tumor suppressor genes
- (2015) Min Zhao et al. NUCLEIC ACIDS RESEARCH
- Gene activity in primary T cells infected with HIV89.6: intron retention and induction of genomic repeats
- (2015) Scott Sherrill-Mix et al. Retrovirology
- Human endogenous retroviruses sustain complex and cooperative regulation of gene-containing loci and unannotated megabase-sized regions
- (2015) Martin Sokol et al. Retrovirology
- Mutational landscape determines sensitivity to PD-1 blockade in non-small cell lung cancer
- (2015) N. A. Rizvi et al. SCIENCE
- Immune regulation by low doses of the DNA methyltransferase inhibitor 5-azacitidine in common human epithelial cancers
- (2015) Huili Li et al. Oncotarget
- 5-azacytidine inhibits nonsense-mediated decay in a MYC-dependent fashion
- (2014) M. Bhuvanagiri et al. EMBO Molecular Medicine
- Vascular histone deacetylation by pharmacological HDAC inhibition
- (2014) Haloom Rafehi et al. GENOME RESEARCH
- At the tipping point for epigenetic therapies in cancer
- (2014) Peter A. Jones JOURNAL OF CLINICAL INVESTIGATION
- New and emerging HDAC inhibitors for cancer treatment
- (2014) Alison C. West et al. JOURNAL OF CLINICAL INVESTIGATION
- Clinical development of demethylating agents in hematology
- (2014) Shyamala C. Navada et al. JOURNAL OF CLINICAL INVESTIGATION
- An atlas of active enhancers across human cell types and tissues
- (2014) Robin Andersson et al. NATURE
- Distinct isoform of FABP7 revealed by screening for retroelement-activated genes in diffuse large B-cell lymphoma
- (2014) F. E. Lock et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Eradication of metastatic mouse cancers resistant to immune checkpoint blockade by suppression of myeloid-derived cells
- (2014) K. Kim et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Extensive localization of long noncoding RNAs to the cytosol and mono- and polyribosomal complexes
- (2014) Sebastiaan van Heesch et al. GENOME BIOLOGY
- Genomic impact of transient low-dose decitabine treatment on primary AML cells
- (2013) J. M. Klco et al. BLOOD
- Azacitidine and donor lymphocyte infusions as first salvage therapy for relapse of AML or MDS after allogeneic stem cell transplantation
- (2013) T Schroeder et al. LEUKEMIA
- DNA hypomethylation within specific transposable element families associates with tissue-specific enhancer landscape
- (2013) Mingchao Xie et al. NATURE GENETICS
- The long noncoding RNA SChLAP1 promotes aggressive prostate cancer and antagonizes the SWI/SNF complex
- (2013) John R Prensner et al. NATURE GENETICS
- Tagmentation-based whole-genome bisulfite sequencing
- (2013) Qi Wang et al. Nature Protocols
- Software for Computing and Annotating Genomic Ranges
- (2013) Michael Lawrence et al. PLoS Computational Biology
- Association of Endogenous Retroviruses and Long Terminal Repeats with Human Disorders
- (2013) Iyoko Katoh et al. Frontiers in Oncology
- HDAC inhibitor-based therapies: Can we interpret the code?
- (2012) Maria New et al. Molecular Oncology
- BSmooth: from whole genome bisulfite sequencing reads to differentially methylated regions
- (2012) Kasper D Hansen et al. GENOME BIOLOGY
- Ribosome Profiling of Mouse Embryonic Stem Cells Reveals the Complexity and Dynamics of Mammalian Proteomes
- (2011) Nicholas T. Ingolia et al. CELL
- Quantitative analyses of DAPK1 methylation in AML and MDS
- (2011) Rainer Claus et al. INTERNATIONAL JOURNAL OF CANCER
- Systematic Clustering of Transcription Start Site Landscapes
- (2011) Xiaobei Zhao et al. PLoS One
- Combination Epigenetic Therapy Has Efficacy in Patients with Refractory Advanced Non-Small Cell Lung Cancer
- (2011) R. A. Juergens et al. Cancer Discovery
- The DNA demethylating agent 5-aza-2′-deoxycytidine induces expression of NY-ESO-1 and other cancer/testis antigens in myeloid leukemia cells
- (2010) Maika Almstedt et al. LEUKEMIA RESEARCH
- Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
- (2010) Sven Heinz et al. MOLECULAR CELL
- The mechanism of eukaryotic translation initiation and principles of its regulation
- (2010) Richard J. Jackson et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Long-range function of an intergenic retrotransposon
- (2010) W. Pi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Differential expression analysis for sequence count data
- (2010) Simon Anders et al. GENOME BIOLOGY
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- Endogenous retroviral LTRs as promoters for human genes: A critical assessment
- (2009) Carla J. Cohen et al. GENE
- Human DNA methylomes at base resolution show widespread epigenomic differences
- (2009) Ryan Lister et al. NATURE
- UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs
- (2009) Giorgio Grillo et al. NUCLEIC ACIDS RESEARCH
- Upstream open reading frames cause widespread reduction of protein expression and are polymorphic among humans
- (2009) S. E. Calvo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Epigenetic Enhancement of Antigen Processing and Presentation Promotes Immune Recognition of Tumors
- (2008) A. F. Setiadi et al. CANCER RESEARCH
- CTdatabase: a knowledge-base of high-throughput and curated data on cancer-testis antigens
- (2008) L. G. Almeida et al. NUCLEIC ACIDS RESEARCH
- Model-based Analysis of ChIP-Seq (MACS)
- (2008) Yong Zhang et al. GENOME BIOLOGY
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started