Environment and host species shape the skin microbiome of captive neotropical bats

Phyllostomid bat microbiome composition is associated to host phylogeny and feeding strategies

(2015) Mario Carrillo-Araujo et al.   Frontiers in Microbiology

The Tasmanian devil microbiome—implications for conservation and management

(2015) Yuanyuan Cheng et al.   Microbiome

Bacteria Isolated from Bats Inhibit the Growth of Pseudogymnoascus destructans, the Causative Agent of White-Nose Syndrome

(2015) Joseph R. Hoyt et al.   PLoS One

Effects of Host Phylogeny and Habitats on Gut Microbiomes of Oriental River Prawn (Macrobrachium nipponense)

(2015) Tzong-Der Tzeng et al.   PLoS One

The Influence of Age and Gender on Skin-Associated Microbial Communities in Urban and Rural Human Populations

(2015) Shi Ying et al.   PLoS One

The effect of captivity on the cutaneous bacterial community of the critically endangered Panamanian golden frog (Atelopus zeteki)

(2014) Matthew H. Becker et al.   BIOLOGICAL CONSERVATION

A preliminary report on the contact-independent antagonism of Pseudogymnoascus destructans by Rhodococcus rhodochrousstrain DAP96253

(2014) Christopher T Cornelison et al.   BMC MICROBIOLOGY

Amphibian skin may select for rare environmental microbes

(2014) Jenifer B Walke et al.   ISME Journal

The Skin Microbiome in Healthy and Allergic Dogs

(2014) Aline Rodrigues Hoffmann et al.   PLoS One

Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible

(2014) Paul J. McMurdie et al.   PLoS Computational Biology

Distribution-Based Clustering: Using Ecology To Refine the Operational Taxonomic Unit

(2013) Sarah P. Preheim et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PERMANOVA, ANOSIM, and the Mantel test in the face of heterogeneous dispersions: What null hypothesis are you testing?

(2013) Marti J. Anderson et al.   ECOLOGICAL MONOGRAPHS

Phylogenetic evaluation of Geomyces and allies reveals no close relatives of Pseudogymnoascus destructans, comb. nov., in bat hibernacula of eastern North America

(2013) Andrew M. Minnis et al.   Fungal Biology

Sympatric chimpanzees and gorillas harbor convergent gut microbial communities

(2013) A. H. Moeller et al.   GENOME RESEARCH

Microbial community dynamics and effect of environmental microbial reservoirs on red-backed salamanders (Plethodon cinereus)

(2013) Andrew H Loudon et al.   ISME Journal

Robust estimation of microbial diversity in theory and in practice

(2013) Bart Haegeman et al.   ISME Journal

The amphibian skin-associated microbiome across species, space and life history stages

(2013) Jordan G. Kueneman et al.   MOLECULAR ECOLOGY

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Cohabiting family members share microbiota with one another and with their dogs

(2013) Se Jin Song et al.   eLife

Abundance-weighted phylogenetic diversity measures distinguish microbial community states and are robust to sampling depth

(2013) Connor O. McCoy et al.   PeerJ

Microbiome analysis among bats describes influences of host phylogeny, life history, physiology and geography

(2012) CALEB D. PHILLIPS et al.   MOLECULAR ECOLOGY

Phospholipids and insulin resistance in psychosis: a lipidomics study of twin pairs discordant for schizophrenia

(2012) Matej Orešič et al.   Genome Medicine

Evidence for a core gut microbiota in the zebrafish

(2011) Guus Roeselers et al.   ISME Journal

Co-habiting amphibian species harbor unique skin bacterial communities in wild populations

(2011) Valerie J McKenzie et al.   ISME Journal

Experimental infection of bats with Geomyces destructans causes white-nose syndrome

(2011) Jeffrey M. Lorch et al.   NATURE

The skin microbiome

(2011) Elizabeth A. Grice et al.   NATURE REVIEWS MICROBIOLOGY

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Social Organization of the Bat, Carollia perspicillata (Chiroptera: Phyllostomidae)

(2010) Charles F. Williams   ETHOLOGY

UniFrac: an effective distance metric for microbial community comparison

(2010) Catherine Lozupone et al.   ISME Journal

Geomyces destructans sp. nov. associated with bat white-nose syndrome

(2010) A. Gargas et al.   MYCOTAXON

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolutionary Relationships of Wild Hominids Recapitulated by Gut Microbial Communities

(2010) Howard Ochman et al.   PLOS BIOLOGY

Gender-linked differences in human skin

(2009) Paolo U. Giacomoni et al.   JOURNAL OF DERMATOLOGICAL SCIENCE

Phylogenetic diversity: a quantitative framework for measurement of priority and achievement in biodiversity conservation

(2008) GARY M. BARKER   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Amphibian Chemical Defense: Antifungal Metabolites of the Microsymbiont Janthinobacterium lividum on the Salamander Plethodon cinereus

(2008) Robert M. Brucker et al.   JOURNAL OF CHEMICAL ECOLOGY

The influence of sex, handedness, and washing on the diversity of hand surface bacteria

(2008) N. Fierer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA