Evidence for a core gut microbiota in the zebrafish

Microbial diversity of intestinal contents and mucus in yellow catfish (Pelteobagrus fulvidraco)

(2010) Shangong Wu et al.   AQUACULTURE

Host–microbe interactions in the developing zebrafish

(2010) Michelle Kanther et al.   CURRENT OPINION IN IMMUNOLOGY

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

(2010) Susan M. Huse et al.   ENVIRONMENTAL MICROBIOLOGY

UniFrac: an effective distance metric for microbial community comparison

(2010) Catherine Lozupone et al.   ISME Journal

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Site and Strain-Specific Variation in Gut Microbiota Profiles and Metabolism in Experimental Mice

(2010) Melissa K. Friswell et al.   PLoS One

Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins

(2010) P. J. Turnbaugh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Epithelial cell proliferation in the developing zebrafish intestine is regulated by the Wnt pathway and microbial signaling via Myd88

(2010) S. E. Cheesman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular characterization of the cloacal microbiota of wild and captive parrots

(2010) Panagiotis G. Xenoulis et al.   VETERINARY MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microbial community diversity associated with the intestinal mucosa of farmed rainbow trout (Oncoryhnchus mykissWalbaum)

(2009) Daniel L Merrifield et al.   AQUACULTURE RESEARCH

Induction of Intestinal Th17 Cells by Segmented Filamentous Bacteria

(2009) Ivaylo I. Ivanov et al.   CELL

Characterization of the intestinal microbiota of two Antarctic notothenioid fish species

(2009) Naomi L. Ward et al.   EXTREMOPHILES

Molecular analysis of intestinal microbiota of rainbow trout (Oncorhynchus mykiss)

(2009) Paola Navarrete et al.   FEMS MICROBIOLOGY ECOLOGY

Patterns and Scales in Gastrointestinal Microbial Ecology

(2009) J. Gray Camp et al.   GASTROENTEROLOGY

Oxazolone-Induced Enterocolitis in Zebrafish Depends on the Composition of the Intestinal Microbiota

(2009) Sylvia Brugman et al.   GASTROENTEROLOGY

The NIH Human Microbiome Project

(2009) et al.   GENOME RESEARCH

Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data

(2009) Micah Hamady et al.   ISME Journal

XplorSeq: A software environment for integrated management and phylogenetic analysis of metagenomic sequence data

(2008) Daniel N Frank   BMC BIOINFORMATICS

Molecular Analysis of Microbiota Along the Digestive Tract of Juvenile Atlantic Salmon (Salmo salar L.)

(2008) P. Navarrete et al.   MICROBIAL ECOLOGY

Comparison of the Cecal Microbiota of Domestic and Wild Turkeys

(2008) Alexandra J Scupham et al.   MICROBIAL ECOLOGY

A core gut microbiome in obese and lean twins

(2008) Peter J. Turnbaugh et al.   NATURE

Sex-specific perceptual spaces for a vertebrate basal social aggregative behavior

(2008) R. E. Engeszer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolution of Mammals and Their Gut Microbes

(2008) R. E. Ley et al.   SCIENCE

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY