Comparison of Fusarium graminearum Transcriptomes on Living or Dead Wheat Differentiates Substrate-Responsive and Defense-Responsive Genes

Genome-Wide Analysis of Small Secreted Cysteine-Rich Proteins Identifies Candidate Effector Proteins Potentially Involved in Fusarium graminearum−Wheat Interactions

(2016) Shunwen Lu et al.   PHYTOPATHOLOGY

The Role of Pathogen-Secreted Proteins in Fungal Vascular Wilt Diseases

(2015) Mara de Sain et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Joint Transcriptomic and Metabolomic Analyses Reveal Changes in the Primary Metabolism and Imbalances in the Subgenome Orchestration in the Bread Wheat Molecular Response to Fusarium graminearum

(2015) Thomas Nussbaumer et al.   G3-Genes Genomes Genetics

Transcriptome analysis of wheat inoculated with Fusarium graminearum

(2015) Mustafa Erayman et al.   Frontiers in Plant Science

GC–MS based targeted metabolic profiling identifies changes in the wheat metabolome following deoxynivalenol treatment

(2014) Benedikt Warth et al.   Metabolomics

Histone H3K9 and H3K27 methylation regulates fungal alkaloid biosynthesis in a fungal endophyte-plant symbiosis

(2014) Tetsuya Chujo et al.   MOLECULAR MICROBIOLOGY

The Fusarium graminearum Genome Reveals More Secondary Metabolite Gene Clusters and Hints of Horizontal Gene Transfer

(2014) Christian M. K. Sieber et al.   PLoS One

Epigenetic Control of Effector Gene Expression in the Plant Pathogenic Fungus Leptosphaeria maculans

(2014) Jessica L. Soyer et al.   PLoS Genetics

The Fusarium graminearum Histone H3 K27 Methyltransferase KMT6 Regulates Development and Expression of Secondary Metabolite Gene Clusters

(2013) Lanelle R. Connolly et al.   PLoS Genetics

Deciphering the Cryptic Genome: Genome-wide Analyses of the Rice Pathogen Fusarium fujikuroi Reveal Complex Regulation of Secondary Metabolism and Novel Metabolites

(2013) Philipp Wiemann et al.   PLoS Pathogens

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

The chromatin code of fungal secondary metabolite gene clusters

(2012) Agnieszka Gacek et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

In Planta Stage-Specific Fungal Gene Profiling Elucidates the Molecular Strategies of Fusarium graminearum Growing inside Wheat Coleoptiles

(2012) X.-W. Zhang et al.   PLANT CELL

A Unified Effort to Fight an Enemy of Wheat and Barley: Fusarium Head Blight

(2012) Marcia McMullen et al.   PLANT DISEASE

The Wor1-like Protein Fgp1 Regulates Pathogenicity, Toxin Synthesis and Reproduction in the Phytopathogenic Fungus Fusarium graminearum

(2012) Wilfried Jonkers et al.   PLoS Pathogens

Early activation of wheat polyamine biosynthesis during Fusarium head blight implicates putrescine as an inducer of trichothecene mycotoxin production

(2011) Donald M Gardiner et al.   BMC PLANT BIOLOGY

Fusarium graminearum forms mycotoxin producing infection structures on wheat

(2011) Marike J Boenisch et al.   BMC PLANT BIOLOGY

Npc1 is involved in sterol trafficking in the filamentous fungus Fusarium graminearum

(2011) Andrew Breakspear et al.   FUNGAL GENETICS AND BIOLOGY

Heterochromatin influences the secondary metabolite profile in the plant pathogen Fusarium graminearum

(2011) Yazmid Reyes-Dominguez et al.   FUNGAL GENETICS AND BIOLOGY

The Transcriptome of Fusarium graminearum During the Infection of Wheat

(2011) Erik Lysøe et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Acidic pH as a determinant ofTRIgene expression and trichothecene B biosynthesis inFusarium graminearum

(2010) J. Merhej et al.   Food Additives and Contaminants Part A-Chemistry Analysis Control Exposure & Risk Assessment

The pH regulatory factor Pac1 regulates Tri gene expression and trichothecene production in Fusarium graminearum

(2010) Jawad Merhej et al.   FUNGAL GENETICS AND BIOLOGY

The Transcription Factor FgStuAp Influences Spore Development, Pathogenicity, and Secondary Metabolism inFusarium graminearum

(2010) Erik Lysøe et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

GOing Bayesian: model-based gene set analysis of genome-scale data

(2010) Sebastian Bauer et al.   NUCLEIC ACIDS RESEARCH

FGDB: revisiting the genome annotation of the plant pathogen Fusarium graminearum

(2010) P. Wong et al.   NUCLEIC ACIDS RESEARCH

Simultaneous determination of 186 fungal and bacterial metabolites in indoor matrices by liquid chromatography/tandem mass spectrometry

(2009) Vinay Vishwanath et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

A reference-gene-based quantitative PCR method as a tool to determine Fusarium resistance in wheat

(2009) Kurt Brunner et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Nutrient profiling reveals potent inducers of trichothecene biosynthesis in Fusarium graminearum

(2009) Donald M. Gardiner et al.   FUNGAL GENETICS AND BIOLOGY

Low pH regulates the production of deoxynivalenol by Fusarium graminearum

(2009) D. M. Gardiner et al.   MICROBIOLOGY-SGM

Global gene regulation byFusariumtranscription factorsTri6andTri10reveals adaptations for toxin biosynthesis

(2009) Kye-Yong Seong et al.   MOLECULAR MICROBIOLOGY

Novel Genes of Fusarium graminearum That Negatively Regulate Deoxynivalenol Production and Virulence

(2009) Donald M. Gardiner et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Triacylglyceride Metabolism byFusarium graminearumDuring Colonization and Sexual Development on Wheat

(2009) John C. Guenther et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Action and reaction of host and pathogen during Fusarium head blight disease

(2009) Stephanie Walter et al.   NEW PHYTOLOGIST

For Blighted Waves of Grain: Fusarium graminearum in the Postgenomics Era

(2009) F. Trail   PLANT PHYSIOLOGY

Functional analyses of heterotrimeric G protein G  and G  subunits in Gibberella zeae

(2008) H.-Y. Yu et al.   MICROBIOLOGY-SGM

Phases of Infection and Gene Expression ofFusarium graminearumDuring Crown Rot Disease of Wheat

(2008) Amber E. Stephens et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Conidial germination in the filamentous fungus Fusarium graminearum

(2007) Kye-Yong Seong et al.   FUNGAL GENETICS AND BIOLOGY