Comparative genomics of Edwardsiella anguillarum and Edwardsiella piscicida isolated in Taiwan enables the identification of distinctive features and potential virulence factors using Oxford‐Nanopore MinION ® sequencing
出版年份 2022 全文链接
标题
Comparative genomics of
Edwardsiella anguillarum
and
Edwardsiella piscicida
isolated in Taiwan enables the identification of distinctive features and potential virulence factors using
Oxford‐Nanopore MinION
® sequencing
作者
关键词
-
出版物
JOURNAL OF FISH DISEASES
Volume -, Issue -, Pages -
出版商
Wiley
发表日期
2022-12-26
DOI
10.1111/jfd.13743
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Phenotypic differences between Edwardsiella piscicida and Edwardsiella anguillarum isolates in Japan
- (2022) Hidehiro Sugiura et al. JOURNAL OF AQUATIC ANIMAL HEALTH
- Phenotypic and genotypic analysis of Edwardsiella isolates from Taiwan indicates wide variation with a particular reference to Edwardsiella tarda and Edwardsiella anguillarum
- (2022) Atiek Rahmawaty et al. JOURNAL OF FISH DISEASES
- Evaluation of Edwardsiella piscicida basS and basR mutants as vaccine candidates in catfish against edwardsiellosis
- (2022) Mohamed Sayed et al. JOURNAL OF FISH DISEASES
- Comparative genomics of Edwardsiella ictaluri revealed four distinct host-specific genotypes and thirteen potential vaccine candidates
- (2021) Vimbai Irene Machimbirike et al. GENOMICS
- Virulence and live vaccine potential of Edwardsiella piscicida phoP and phoQ mutants in catfish against edwardsiellosis
- (2021) Mohamed Sayed et al. JOURNAL OF FISH DISEASES
- Characterization of Edwardsiella piscicida CK108 flagellin genes and evaluation of their potential as vaccine targets in the zebrafish model
- (2021) Yunjeong Choe et al. JOURNAL OF FISH DISEASES
- An Edwardsiella piscicida esaS mutant reveals contribution to virulence and vaccine potential
- (2020) Asmaa Edrees et al. MICROBIAL PATHOGENESIS
- Comparative genomics of the fish pathogens Edwardsiella ictaluri 93-146 and Edwardsiella piscicida C07-087
- (2020) Hasan C. Tekedar et al. Microbial Genomics
- Characterization and Pathological Analysis of a Virulent Edwardsiella anguillarum Strain Isolated From Nile Tilapia (Oreochromis niloticus) in Korea
- (2020) Woo Taek Oh et al. Frontiers in Veterinary Science
- Emerging bacterial fish pathogen Lactococcus garvieae RTCLI04, isolated from rainbow trout (Oncorhynchus mykiss): Genomic features and comparative genomics
- (2020) Neetu Shahi et al. MICROBIAL PATHOGENESIS
- OrthoVenn2: a web server for whole-genome comparison and annotation of orthologous clusters across multiple species
- (2019) Ling Xu et al. NUCLEIC ACIDS RESEARCH
- The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities
- (2019) James J Davis et al. NUCLEIC ACIDS RESEARCH
- Population genetic and evolution analysis of controversial genus Edwardsiella by multilocus sequence typing
- (2018) Noemí Buján et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Genetic studies to re-affiliate Edwardsiella tarda fish isolates to Edwardsiella piscicida and Edwardsiella anguillarum species
- (2018) Noemí Buján et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- Evaluation of an outer membrane protein as a vaccine against Edwardsiella anguillarum in Japanese eels (Anguilla japonica)
- (2018) Duan LiHua et al. AQUACULTURE
- Immunogenicity of a bivalent protein as a vaccine against Edwardsiella anguillarum and Vibrio vulnificus in Japanese eel (Anguilla japonica )
- (2018) Songlin Guo et al. MicrobiologyOpen
- Canu: scalable and accurate long-read assembly via adaptivek-mer weighting and repeat separation
- (2017) Sergey Koren et al. GENOME RESEARCH
- IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets
- (2017) Claire Bertelli et al. NUCLEIC ACIDS RESEARCH
- Glycolysis-related proteins are broad spectrum vaccine candidates against aquacultural pathogens
- (2017) Xiaohong Liu et al. VACCINE
- Flagellin enhances the immunoprotection of formalin-inactivated Edwardsiella tarda vaccine in turbot
- (2017) Xiaohong Liu et al. VACCINE
- Edwardsiella tarda Outer Membrane Protein C: An Immunogenic Protein Induces Highly Protective Effects in Flounder (Paralichthys olivaceus) against Edwardsiellosis
- (2016) Fuguo Liu et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- DNA vaccine encoding molecular chaperone GroEL of Edwardsiella tarda confers protective efficacy against edwardsiellosis
- (2016) Fuguo Liu et al. MOLECULAR IMMUNOLOGY
- Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center
- (2016) Alice R. Wattam et al. NUCLEIC ACIDS RESEARCH
- Oxford Nanopore MinION Sequencing and Genome Assembly
- (2016) Hengyun Lu et al. GENOMICS PROTEOMICS & BIOINFORMATICS
- Identification of protein secretion systems in bacterial genomes
- (2016) Sophie S. Abby et al. Scientific Reports
- Insights into the virulence-related genes of Edwardsiella tarda isolated from turbot in Europe: genetic homogeneity and evidence for vibrioferrin production
- (2015) N Castro et al. JOURNAL OF FISH DISEASES
- Comparison ofEdwardsiella ictaluriisolates from different hosts and geographic origins
- (2015) M J Griffin et al. JOURNAL OF FISH DISEASES
- Phylogenomics characterization of a highly virulent Edwardsiella strain ET080813T encoding two distinct T3SS and three T6SS gene clusters: Propose a novel species as Edwardsiella anguillarum sp. nov.
- (2015) Shuai Shao et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes
- (2015) Thomas Brettin et al. Scientific Reports
- Prokka: rapid prokaryotic genome annotation
- (2014) T. Seemann BIOINFORMATICS
- Key components of the eight classes of type IV secretion systems involved in bacterial conjugation or protein secretion
- (2014) Julien Guglielmini et al. NUCLEIC ACIDS RESEARCH
- Phylogenetic investigation of Edwardsiella tarda with multilocus sequence typing (MLST) and pulsed field gel electrophoresis (PFGE) typing methods
- (2013) Minjun Yang et al. AQUACULTURE
- Asd-based balanced-lethal system in attenuated Edwardsiella tarda to express a heterologous antigen for a multivalent bacterial vaccine
- (2013) Yijian Yan et al. FISH & SHELLFISH IMMUNOLOGY
- Edwardsiella tarda mutant disrupted in type III secretion system and chorismic acid synthesis and cured of a plasmid as a live attenuated vaccine in turbot
- (2013) Jingfan Xiao et al. FISH & SHELLFISH IMMUNOLOGY
- Phenotypic traits, virulence-associated gene profile and genetic relatedness ofEdwardsiella tardaisolates from Japanese eelAnguilla japonicain Korea
- (2013) K.I. Kim et al. LETTERS IN APPLIED MICROBIOLOGY
- Genetic diversity and new genotyping scheme for fish pathogenicStreptococcus agalactiae
- (2013) D.T. Godoy et al. LETTERS IN APPLIED MICROBIOLOGY
- The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)
- (2013) Ross Overbeek et al. NUCLEIC ACIDS RESEARCH
- Edwardsiella piscicida sp. nov.,a novel species pathogenic to fish
- (2012) T. Abayneh et al. JOURNAL OF APPLIED MICROBIOLOGY
- Edwardsiella Comparative Phylogenomics Reveal the New Intra/Inter-Species Taxonomic Relationships, Virulence Evolution and Niche Adaptation Mechanisms
- (2012) Minjun Yang et al. PLoS One
- The Non-Flagellar Type III Secretion System Evolved from the Bacterial Flagellum and Diversified into Host-Cell Adapted Systems
- (2012) Sophie S. Abby et al. PLoS Genetics
- Intraspecific genetic variability of Edwardsiella tarda strains from cultured turbot
- (2011) N Castro et al. DISEASES OF AQUATIC ORGANISMS
- A Case of Liver Abscess Caused by Edwardsiella tardaa
- (2011) Takayuki Ota et al. INTERNAL MEDICINE
- Development of an effective Edwardsiella tarda vaccine for cultured turbot (Scophthalmus maximus)
- (2008) N CASTRO et al. FISH & SHELLFISH IMMUNOLOGY
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now