BERT-Promoter: An improved sequence-based predictor of DNA promoter using BERT pre-trained model and SHAP feature selection
出版年份 2022 全文链接
标题
BERT-Promoter: An improved sequence-based predictor of DNA promoter using BERT pre-trained model and SHAP feature selection
作者
关键词
-
出版物
COMPUTATIONAL BIOLOGY AND CHEMISTRY
Volume 99, Issue -, Pages 107732
出版商
Elsevier BV
发表日期
2022-07-14
DOI
10.1016/j.compbiolchem.2022.107732
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- BERT-GT: Cross-sentence n-ary relation extraction with BERT and graph transformer
- (2021) Po-Ting Lai et al. BIOINFORMATICS
- BERT4Bitter: a bidirectional encoder representations from transformers (BERT)-based model for improving the prediction of bitter peptides
- (2021) Phasit Charoenkwan et al. BIOINFORMATICS
- A transformer architecture based on BERT and 2D convolutional neural network to identify DNA enhancers from sequence information
- (2021) Nguyen Quoc Khanh Le et al. BRIEFINGS IN BIOINFORMATICS
- A sequence-based prediction of Kruppel-like factors proteins using XGBoost and optimized features
- (2021) Nguyen Quoc Khanh Le et al. GENE
- Using extreme gradient boosting to identify origin of replication in Saccharomyces cerevisiae via hybrid features
- (2020) Duyen Thi Do et al. GENOMICS
- An intelligent computational model for prediction of promoters and their strength via natural language processing
- (2020) Muhammad Tahir et al. CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS
- DeePromoter: Robust Promoter Predictor Using Deep Learning
- (2019) Mhaned Oubounyt et al. Frontiers in Genetics
- Identification of prokaryotic promoters and their strength by integrating heterogeneous features
- (2019) Hilal Tayara et al. GENOMICS
- Classifying Promoters by Interpreting the Hidden Information of DNA Sequences via Deep Learning and Combination of Continuous FastText N-Grams
- (2019) Nguyen Quoc Khanh Le et al. Frontiers in Bioengineering and Biotechnology
- iPSW(2L)-PseKNC: A two-layer predictor for identifying promoters and their strength by hybrid features via pseudo K-tuple nucleotide composition
- (2018) Xuan Xiao et al. GENOMICS
- Recognition of prokaryotic and eukaryotic promoters using convolutional deep learning neural networks
- (2017) Ramzan Kh. Umarov et al. PLoS One
- RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyond
- (2015) Socorro Gama-Castro et al. NUCLEIC ACIDS RESEARCH
- Structural Properties of Gene Promoters Highlight More than Two Phenotypes of Diabetes
- (2015) Constantin Ionescu-Tîrgovişte et al. PLoS One
- The role of ATF-2 in oncogenesis
- (2008) Spiros A. Vlahopoulos et al. BIOESSAYS
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