A sequence-based prediction of Kruppel-like factors proteins using XGBoost and optimized features

Using extreme gradient boosting to identify origin of replication in Saccharomyces cerevisiae via hybrid features

(2020) Duyen Thi Do et al.   GENOMICS

Meta-i6mA: an interspecies predictor for identifying DNA N6-methyladenine sites of plant genomes by exploiting informative features in an integrative machine-learning framework

(2020) Md Mehedi Hasan et al.   BRIEFINGS IN BIOINFORMATICS

Computational prediction of species-specific yeast DNA replication origin via iterative feature representation

(2020) Balachandran Manavalan et al.   BRIEFINGS IN BIOINFORMATICS

Identification of clathrin proteins by incorporating hyperparameter optimization in deep learning and PSSM profiles

(2019) Nguyen Quoc Khanh Le et al.   COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE

i4mC-ROSE, a bioinformatics tool for the identification of DNA N4-methylcytosine sites in the Rosaceae genome

(2019) Md. Mehedi Hasan et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

iFeature: a Python package and web server for features extraction and selection from protein and peptide sequences

(2018) Zhen Chen et al.   BIOINFORMATICS

UniProt: a worldwide hub of protein knowledge

(2018)   NUCLEIC ACIDS RESEARCH

Incorporating deep learning with convolutional neural networks and position specific scoring matrices for identifying electron transport proteins

(2017) Nguyen-Quoc-Khanh Le et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Database resources of the National Center for Biotechnology Information

(2017) et al.   NUCLEIC ACIDS RESEARCH

Characterization and phylogenetic analysis of Krüppel-like transcription factor (KLF) gene family in tree shrews (Tupaia belangeri chinensis)

(2016) Ming Shao et al.   Oncotarget

Comprehensive Identification of Krüppel-Like Factor Family Members Contributing to the Self-Renewal of Mouse Embryonic Stem Cells and Cellular Reprogramming

(2016) Hyojung Jeon et al.   PLoS One

Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation

(2015) Nuala A. O'Leary et al.   NUCLEIC ACIDS RESEARCH

A New Family of Predicted Krüppel-Like Factor Genes and Pseudogenes in Placental Mammals

(2013) Jimin Pei et al.   PLoS One

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

Krüppel-like factor 4 regulates pressure-induced cardiac hypertrophy

(2010) Xudong Liao et al.   JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY

Mammalian Krüppel-Like Factors in Health and Diseases

(2010) Beth B. McConnell et al.   PHYSIOLOGICAL REVIEWS

A unique sequence in the N-terminal regulatory region controls the nuclear localization of KLF8 by cooperating with the C-terminal zinc-fingers

(2009) Tina S Mehta et al.   CELL RESEARCH

Porcine KLF gene family: Structure, mapping, and phylogenetic analysis

(2009) Zhilong Chen et al.   GENOMICS

Keep Your Fingers Off My DNA: Protein–Protein Interactions Mediated by C2H2 Zinc Finger Domains

(2008) Kathryn J. Brayer et al.   CELL BIOCHEMISTRY AND BIOPHYSICS

Transcriptional Regulation of Adipogenesis by KLF4

(2008) Kıvanç Birsoy et al.   Cell Metabolism

Krüppel-like transcription factors: A functional family

(2007) Richard Pearson et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY