RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyond
出版年份 2015 全文链接
标题
RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyond
作者
关键词
-
出版物
NUCLEIC ACIDS RESEARCH
Volume 44, Issue D1, Pages D133-D143
出版商
Oxford University Press (OUP)
发表日期
2015-11-03
DOI
10.1093/nar/gkv1156
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- The functional landscape bound to the transcription factors of Escherichia coli K-12
- (2015) Ernesto Pérez-Rueda et al. COMPUTATIONAL BIOLOGY AND CHEMISTRY
- RSAT 2015: Regulatory Sequence Analysis Tools
- (2015) Alejandra Medina-Rivera et al. NUCLEIC ACIDS RESEARCH
- Decoding genome-wide GadEWX-transcriptional regulatory networks reveals multifaceted cellular responses to acid stress in Escherichia coli
- (2015) Sang Woo Seo et al. Nature Communications
- Genome-wide Reconstruction of OxyR and SoxRS Transcriptional Regulatory Networks under Oxidative Stress in Escherichia coli K-12 MG1655
- (2015) Sang Woo Seo et al. Cell Reports
- Global Transcriptional Start Site Mapping Using Differential RNA Sequencing Reveals Novel Antisense RNAs in Escherichia coli
- (2014) Maureen K. Thomason et al. JOURNAL OF BACTERIOLOGY
- The SUPERFAMILY 1.75 database in 2014: a doubling of data
- (2014) Matt E. Oates et al. NUCLEIC ACIDS RESEARCH
- HAMAP in 2015: updates to the protein family classification and annotation system
- (2014) Ivo Pedruzzi et al. NUCLEIC ACIDS RESEARCH
- ArrayExpress update—simplifying data submissions
- (2014) Nikolay Kolesnikov et al. NUCLEIC ACIDS RESEARCH
- COLOMBOS v2.0: an ever expanding collection of bacterial expression compendia: Table 1.
- (2013) Pieter Meysman et al. NUCLEIC ACIDS RESEARCH
- CollecTF: a database of experimentally validated transcription factor-binding sites in Bacteria
- (2013) Sefa Kılıç et al. NUCLEIC ACIDS RESEARCH
- Pfam: the protein families database
- (2013) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more
- (2012) Heladia Salgado et al. NUCLEIC ACIDS RESEARCH
- EcoCyc: fusing model organism databases with systems biology
- (2012) Ingrid M. Keseler et al. NUCLEIC ACIDS RESEARCH
- NCBI GEO: archive for functional genomics data sets—update
- (2012) Tanya Barrett et al. NUCLEIC ACIDS RESEARCH
- Prokaryotic genome regulation: A revolutionary paradigm
- (2012) Akira ISHIHAMA PROCEEDINGS OF THE JAPAN ACADEMY SERIES B-PHYSICAL AND BIOLOGICAL SCIENCES
- Improved similarity scores for comparing motifs
- (2011) Emi Tanaka et al. BIOINFORMATICS
- Novel roles of LeuO in transcription regulation of E. coli genome: antagonistic interplay with the universal silencer H-NS
- (2011) Tomohiro Shimada et al. MOLECULAR MICROBIOLOGY
- Theoretical and empirical quality assessment of transcription factor-binding motifs
- (2011) Alejandra Medina-Rivera et al. NUCLEIC ACIDS RESEARCH
- RSAT 2011: regulatory sequence analysis tools
- (2011) M. Thomas-Chollier et al. NUCLEIC ACIDS RESEARCH
- Novel Roles of cAMP Receptor Protein (CRP) in Regulation of Transport and Metabolism of Carbon Sources
- (2011) Tomohiro Shimada et al. PLoS One
- RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units)
- (2010) S. Gama-Castro et al. NUCLEIC ACIDS RESEARCH
- TB database 2010: Overview and update
- (2010) James E. Galagan et al. TUBERCULOSIS
- Evolvability and hierarchy in rewired bacterial gene networks
- (2008) Mark Isalan et al. NATURE
- CellDesigner 3.5: A Versatile Modeling Tool for Biochemical Networks
- (2008) A. Funahashi et al. PROCEEDINGS OF THE IEEE
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