Phylogenomic Analyses of Alismatales Shed Light into Adaptations to Aquatic Environments
出版年份 2022 全文链接
标题
Phylogenomic Analyses of Alismatales Shed Light into Adaptations to Aquatic Environments
作者
关键词
-
出版物
MOLECULAR BIOLOGY AND EVOLUTION
Volume 39, Issue 5, Pages -
出版商
Oxford University Press (OUP)
发表日期
2022-04-14
DOI
10.1093/molbev/msac079
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Global phylogeography of a pantropical mangrove genus Rhizophora
- (2021) Koji Takayama et al. Scientific Reports
- Chromosomal evolution in seagrasses: Is the chromosome number decreasing?
- (2021) Silmar Luiz da Silva et al. AQUATIC BOTANY
- Genomic insights into molecular adaptation to intertidal environments in the mangrove Aegiceras corniculatum
- (2021) Xiao Feng et al. NEW PHYTOLOGIST
- Plastid phylogenomic insights into relationships of all flowering plant families
- (2021) Hong-Tao Li et al. BMC BIOLOGY
- Complete genus-level plastid phylogenomics of Alismataceae with revisited historical biogeography
- (2021) Zhi-Zhong Li et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- The genome of a cave plant, Primulina huaijiensis , provides insights into adaptation to limestone karst habitats
- (2020) Chao Feng et al. NEW PHYTOLOGIST
- Phylogenomics of the aquatic plant genus Ottelia (Hydrocharitaceae): Implications for historical biogeography
- (2020) Zhi-Zhong Li et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Origins and evolution of cuticle biosynthetic machinery in land plants
- (2020) Lingyao Kong et al. PLANT PHYSIOLOGY
- Origin and Evolution of Core Components Responsible for Monitoring Light Environment Changes during Plant Terrestrialization
- (2019) Xue Han et al. Molecular Plant
- A Comprehensive Survey on the Terpene Synthase Gene Family Provides New Insight into Its Evolutionary Patterns
- (2019) Shu-Ye Jiang et al. Genome Biology and Evolution
- Quartet Sampling distinguishes lack of support from conflicting support in the green plant tree of life
- (2018) James B. Pease et al. AMERICAN JOURNAL OF BOTANY
- The hybrid origin of Potamogeton biwaensis Miki, an endemic submerged plant in Lake Biwa, Japan
- (2018) Satoko Iida et al. AQUATIC BOTANY
- Regeneration and colonization abilities of the invasive species Elodea canadensis and Elodea nuttallii under a salt gradient: implications for freshwater invasibility
- (2018) Lise Thouvenot et al. HYDROBIOLOGIA
- Genomic comparison of two independent seagrass lineages reveals habitat-driven convergent evolution
- (2018) HueyTyng Lee et al. JOURNAL OF EXPERIMENTAL BOTANY
- Widespread Whole Genome Duplications Contribute to Genome Complexity and Species Diversity in Angiosperms
- (2018) Ren Ren et al. Molecular Plant
- A new species of Donlesia (Ceratophyllaceae) from the Early Cretaceous of Kansas, USA
- (2018) Hongshan Wang et al. REVIEW OF PALAEOBOTANY AND PALYNOLOGY
- Aquatic and terrestrial morphotypes of the aquatic invasive plant, Ludwigia grandiflora , show distinct morphological and metabolomic responses
- (2018) Kevin Billet et al. Ecology and Evolution
- Testing for Polytomies in Phylogenetic Species Trees Using Quartet Frequencies
- (2018) et al. Genes
- Monocot plastid phylogenomics, timeline, net rates of species diversification, the power of multi-gene analyses, and a functional model for the origin of monocots
- (2018) Thomas J. Givnish et al. AMERICAN JOURNAL OF BOTANY
- Evolution of Portulacineae Marked by Gene Tree Conflict and Gene Family Expansion Associated with Adaptation to Harsh Environments
- (2018) Ning Wang et al. MOLECULAR BIOLOGY AND EVOLUTION
- The first complete chloroplast genomes of two Alismataceae species, and the phylogenetic relationship under order Alismatales
- (2018) Jiye Liang et al. Mitochondrial DNA Part B-Resources
- The trade-off between digestibility and phenol content influences the food choice of the obligate seagrass-feeding neritid snail Smaragdia souverbiana
- (2017) Alice Rotini et al. JOURNAL OF MOLLUSCAN STUDIES
- Review: Host-pathogen dynamics of seagrass diseases under future global change
- (2017) Brooke K. Sullivan et al. MARINE POLLUTION BULLETIN
- PhyloNetworks: A Package for Phylogenetic Networks
- (2017) Claudia Solís-Lemus et al. MOLECULAR BIOLOGY AND EVOLUTION
- Bayesian Inference of Species Networks from Multilocus Sequence Data
- (2017) Chi Zhang et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genomic features of bacterial adaptation to plants
- (2017) Asaf Levy et al. NATURE GENETICS
- The evolutionary significance of polyploidy
- (2017) Yves Van de Peer et al. NATURE REVIEWS GENETICS
- Improved transcriptome sampling pinpoints 26 ancient and more recent polyploidy events in Caryophyllales, including two allopolyploidy events
- (2017) Ya Yang et al. NEW PHYTOLOGIST
- The origin, diversification and adaptation of a major mangrove clade (Rhizophoreae) revealed by whole genome sequencing
- (2017) Shaohua Xu et al. National Science Review
- An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG IV
- (2016) BOTANICAL JOURNAL OF THE LINNEAN SOCIETY
- Evolutionary timescale of monocots determined by the fossilized birth-death model using a large number of fossil records
- (2016) Satoshi Eguchi et al. EVOLUTION
- Plastid Phylogenomic Analyses Resolve Tofieldiaceae as the Root of the Early Diverging Monocot Order Alismatales
- (2016) Yang Luo et al. Genome Biology and Evolution
- The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea
- (2016) Jeanine L. Olsen et al. NATURE
- The Genome of a Southern Hemisphere Seagrass Species ( Zostera muelleri )
- (2016) HueyTyng Lee et al. PLANT PHYSIOLOGY
- RNA-seq of Ranunculus sceleratus and Identification of Orthologous Genes among Four Ranunculus Species
- (2016) Shu-Ying Zhao et al. Frontiers in Plant Science
- The first draft genome of the aquatic model plant Lemna minor opens the route for future stress physiology research and biotechnological applications
- (2015) Arne Van Hoeck et al. Biotechnology for Biofuels
- Analysis of phylogenomic datasets reveals conflict, concordance, and gene duplications with examples from animals and plants
- (2015) Stephen A Smith et al. BMC EVOLUTIONARY BIOLOGY
- Phylogenetics, divergence times and diversification from three genomic partitions in monocots
- (2015) Kate L. Hertweck et al. BOTANICAL JOURNAL OF THE LINNEAN SOCIETY
- Plastid phylogenomics and molecular evolution of Alismatales
- (2015) T. Gregory Ross et al. CLADISTICS
- Phylogeny of the Alismatales (Monocotyledons) and the relationship ofAcorus(Acorales?)
- (2015) Gitte Petersen et al. CLADISTICS
- Genome-wide survey of the seagrass Zostera muelleri suggests modification of the ethylene signalling network
- (2015) Agnieszka A. Golicz et al. JOURNAL OF EXPERIMENTAL BOTANY
- Resolution of Brassicaceae Phylogeny Using Nuclear Genes Uncovers Nested Radiations and Supports Convergent Morphological Evolution
- (2015) Chien-Hsun Huang et al. MOLECULAR BIOLOGY AND EVOLUTION
- Dissecting Molecular Evolution in the Highly Diverse Plant Clade Caryophyllales Using Transcriptome Sequencing
- (2015) Ya Yang et al. MOLECULAR BIOLOGY AND EVOLUTION
- KEGG as a reference resource for gene and protein annotation
- (2015) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- Phylogenetic tree of vascular plants reveals the origins of aquatic angiosperms
- (2015) Zhi-Yuan Du et al. Journal of Systematics and Evolution
- Orthology Inference in Nonmodel Organisms Using Transcriptomes and Low-Coverage Genomes: Improving Accuracy and Matrix Occupancy for Phylogenomics
- (2014) Ya Yang et al. MOLECULAR BIOLOGY AND EVOLUTION
- Novel Information Theory-Based Measures for Quantifying Incongruence among Phylogenetic Trees
- (2014) Leonidas Salichos et al. MOLECULAR BIOLOGY AND EVOLUTION
- Polyploidy: adaptation to the genomic environment
- (2014) Jesse D. Hollister NEW PHYTOLOGIST
- Evolution of physiological responses to salt stress in hexaploid wheat
- (2014) C. Yang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Direct contribution of the seagrass Thalassia testudinum to lime mud production
- (2014) Susana Enríquez et al. Nature Communications
- BEAST 2: A Software Platform for Bayesian Evolutionary Analysis
- (2014) Remco Bouckaert et al. PLoS Computational Biology
- Detecting and Locating Whole Genome Duplications on a Phylogeny: A Probabilistic Approach
- (2013) Charles-Elie Rabier et al. MOLECULAR BIOLOGY AND EVOLUTION
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Identifying RNA editing sites using RNA sequencing data alone
- (2013) Gokul Ramaswami et al. NATURE METHODS
- De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
- (2013) Brian J Haas et al. Nature Protocols
- Evolution of the bHLH Genes Involved in Stomatal Development: Implications for the Expansion of Developmental Complexity of Stomata in Land Plants
- (2013) Jin-Hua Ran et al. PLoS One
- Polyploids Exhibit Higher Potassium Uptake and Salinity Tolerance in Arabidopsis
- (2013) D.-Y. Chao et al. SCIENCE
- Generic phylogeny, historical biogeography and character evolution of the cosmopolitan aquatic plant family Hydrocharitaceae
- (2012) Ling-Yun Chen et al. BMC EVOLUTIONARY BIOLOGY
- Freshwater Plants Synthesize Sulfated Polysaccharides: Heterogalactans from Water Hyacinth (Eicchornia crassipes)
- (2012) Nednaldo Dantas-Santos et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Global history of the ancient monocot family Araceae inferred with models accounting for past continental positions and previous ranges based on fossils
- (2012) Lars Nauheimer et al. NEW PHYTOLOGIST
- Nicotianamine Functions in the Phloem-Based Transport of Iron to Sink Organs, in Pollen Development and Pollen Tube Growth inArabidopsis
- (2012) Mara Schuler et al. PLANT CELL
- Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
- (2011) Torbjørn Rognes BMC BIOINFORMATICS
- Light-harvesting chlorophyll a/b-binding proteins are required for stomatal response to abscisic acid in Arabidopsis
- (2011) Yan-Hong Xu et al. JOURNAL OF EXPERIMENTAL BOTANY
- Rising from the Sea: Correlations between Sulfated Polysaccharides and Salinity in Plants
- (2011) Rafael S. Aquino et al. PLoS One
- Survey of Branch Support Methods Demonstrates Accuracy, Power, and Robustness of Fast Likelihood-based Approximation Schemes
- (2011) Maria Anisimova et al. SYSTEMATIC BIOLOGY
- Anatomical study of an aquatic mustard: Subularia aquatica (Brassicaceae)
- (2010) Julia S. Nowak et al. AQUATIC BOTANY
- Molecular phylogenetic analyses of Tofieldiaceae (Alismatales): family circumscription and intergeneric relationships
- (2010) Hiroshi Azuma et al. JOURNAL OF PLANT RESEARCH
- Diversity in obscurity: fossil flowers and the early history of angiosperms
- (2010) E. M. Friis et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Identification of hybrids in broad-leaved Potamogeton species (Potamogetonaceae) in China using nuclear and chloroplast DNA sequence data
- (2010) Zhi-Yuan Du et al. PLANT SYSTEMATICS AND EVOLUTION
- Anatomical patterns of aerenchyma in aquatic and wetland plants
- (2009) Jongduk Jung et al. JOURNAL OF PLANT BIOLOGY
- Origin and Diversification of Basic-Helix-Loop-Helix Proteins in Plants
- (2009) N. Pires et al. MOLECULAR BIOLOGY AND EVOLUTION
- The Analysis of Arabidopsis Nicotianamine Synthase Mutants Reveals Functions for Nicotianamine in Seed Iron Loading and Iron Deficiency Responses
- (2009) M. Klatte et al. PLANT PHYSIOLOGY
- PhyloNet: a software package for analyzing and reconstructing reticulate evolutionary relationships
- (2008) Cuong Than et al. BMC BIOINFORMATICS
- Chloroplast Signaling and LESION SIMULATING DISEASE1 Regulate Crosstalk between Light Acclimation and Immunity in Arabidopsis
- (2008) P. Muhlenbock et al. PLANT CELL
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