标题
Genomic features of bacterial adaptation to
plants
作者
关键词
-
出版物
NATURE GENETICS
Volume 50, Issue 1, Pages 138-150
出版商
Springer Nature
发表日期
2017-12-16
DOI
10.1038/s41588-017-0012-9
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Comparative analysis of plant immune receptor architectures uncovers host proteins likely targeted by pathogens
- (2016) Panagiotis F. Sarris et al. BMC BIOLOGY
- Polarized Defense Against Fungal Pathogens Is Mediated by the Jacalin-Related Lectin Domain of Modular Poaceae -Specific Proteins
- (2016) Denise Weidenbach et al. Molecular Plant
- Bacterial pathogenesis of plants: future challenges from a microbial perspective
- (2016) Sebastian Pfeilmeier et al. MOLECULAR PLANT PATHOLOGY
- Swimming and twitching motility are essential for attachment and virulence of Pantoea ananatis in onion seedlings
- (2016) Tania Weller-Stuart et al. MOLECULAR PLANT PATHOLOGY
- Elucidation of gibberellin biosynthesis in bacteria reveals convergent evolution
- (2016) Ryan S Nett et al. Nature Chemical Biology
- Integration of decoy domains derived from protein targets of pathogen effectors into plant immune receptors is widespread
- (2016) Thomas Kroj et al. NEW PHYTOLOGIST
- Chemotaxis signaling systems in model beneficial plant–bacteria associations
- (2016) Birgit E. Scharf et al. PLANT MOLECULAR BIOLOGY
- Integrating biogeochemistry with multiomic sequence information in a model oxygen minimum zone
- (2016) Stilianos Louca et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation
- (2016) Matthew T. Agler et al. PLOS BIOLOGY
- Genome-Wide RNA Sequencing Analysis of Quorum Sensing-Controlled Regulons in the Plant-Associated Burkholderia glumae PG1 Strain
- (2015) Rong Gao et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- A Receptor Pair with an Integrated Decoy Converts Pathogen Disabling of Transcription Factors to Immunity
- (2015) Clémentine Le Roux et al. CELL
- A Plant Immune Receptor Detects Pathogen Effectors that Target WRKY Transcription Factors
- (2015) Panagiotis F. Sarris et al. CELL
- Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley
- (2015) Davide Bulgarelli et al. Cell Host & Microbe
- Microbiota and Host Nutrition across Plant and Animal Kingdoms
- (2015) Stéphane Hacquard et al. Cell Host & Microbe
- CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
- (2015) Donovan H. Parks et al. GENOME RESEARCH
- The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes
- (2015) Pablo R. Hardoim et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Plant-Influenced Gene Expression in the Rice Endophyte Burkholderia kururiensis M130
- (2015) Bruna G. Coutinho et al. MOLECULAR PLANT-MICROBE INTERACTIONS
- Functional overlap of the Arabidopsis leaf and root microbiota
- (2015) Yang Bai et al. NATURE
- Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes
- (2015) Jenni Hultman et al. NATURE
- Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species
- (2015) Devin Coleman-Derr et al. NEW PHYTOLOGIST
- Microbial species delineation using whole genome sequences
- (2015) Neha J. Varghese et al. NUCLEIC ACIDS RESEARCH
- KEGG as a reference resource for gene and protein annotation
- (2015) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- HMMER web server: 2015 update
- (2015) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- The Pfam protein families database: towards a more sustainable future
- (2015) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- Structure, variation, and assembly of the root-associated microbiomes of rice
- (2015) Joseph Edwards et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Native root-associated bacteria rescue a plant from a sudden-wilt disease that emerged during continuous cropping
- (2015) Rakesh Santhanam et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- IMG-ABC: A Knowledge Base To Fuel Discovery of Biosynthetic Gene Clusters and Novel Secondary Metabolites
- (2015) Michalis Hadjithomas et al. mBio
- The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
- (2015) Marcel Huntemann et al. Standards in Genomic Sciences
- Biocontrol mechanism by root-associated Bacillus amyloliquefaciens FZB42 – a review
- (2015) Soumitra Paul Chowdhury et al. Frontiers in Microbiology
- Phylogeny of the class Actinobacteria revisited in the light of complete genomes. The orders 'Frankiales' and Micrococcales should be split into coherent entities: proposal of Frankiales ord. nov., Geodermatophilales ord. nov., Acidothermales ord. nov. and Nakamurellales ord. nov.
- (2014) A. Sen et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- The type VI protein secretion system contributes to biofilm formation and seed-to-seedling transmission ofAcidovorax citrullion melon
- (2014) Yanli Tian et al. MOLECULAR PLANT PATHOLOGY
- Fast and sensitive protein alignment using DIAMOND
- (2014) Benjamin Buchfink et al. NATURE METHODS
- Niche and host-associated functional signatures of the root surface microbiome
- (2014) Maya Ofek-Lalzar et al. Nature Communications
- A novel conserved mechanism for plant NLR protein pairs: the “integrated decoy†hypothesis
- (2014) Stella Cesari et al. Frontiers in Plant Science
- Structure and Functions of the Bacterial Microbiota of Plants
- (2013) Davide Bulgarelli et al. Annual Review of Plant Biology
- Tit-for-Tat: Type VI Secretion System Counterattack during Bacterial Cell-Cell Interactions
- (2013) Marek Basler et al. CELL
- A View to a Kill: The Bacterial Type VI Secretion System
- (2013) Brian T. Ho et al. Cell Host & Microbe
- AmphoraNet: The webserver implementation of the AMPHORA2 metagenomic workflow suite
- (2013) Csaba Kerepesi et al. GENE
- Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants
- (2013) Thomas R Turner et al. ISME Journal
- Functional Conservation of the Capacity for ent-Kaurene Biosynthesis and an Associated Operon in Certain Rhizobia
- (2013) D. M. Hershey et al. JOURNAL OF BACTERIOLOGY
- A Phylum-Level Bacterial Phylogenetic Marker Database
- (2013) Zhang Wang et al. MOLECULAR BIOLOGY AND EVOLUTION
- Insights into the phylogeny and coding potential of microbial dark matter
- (2013) Christian Rinke et al. NATURE
- Diversity and heritability of the maize rhizosphere microbiome under field conditions
- (2013) J. A. Peiffer et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- PNAS Plus: From the Cover: Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate
- (2013) N. A. Bokulich et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Unexpected Diversity during Community Succession in the Apple Flower Microbiome
- (2013) A. Shade et al. mBio
- Activation of Ran GTPase by a Legionella Effector Promotes Microtubule Polymerization, Pathogen Vacuole Motility and Infection
- (2013) Eva Rothmeier et al. PLoS Pathogens
- Global abundance of microbial rhodopsins
- (2012) Omri M Finkel et al. ISME Journal
- Pseudomonas fluorescensInduces Strain-Dependent and Strain-Independent Host Plant Responses in Defense Networks, Primary Metabolism, Photosynthesis, and Fitness
- (2012) David J. Weston et al. MOLECULAR PLANT-MICROBE INTERACTIONS
- Defining the core Arabidopsis thaliana root microbiome
- (2012) Derek S. Lundberg et al. NATURE
- Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota
- (2012) Davide Bulgarelli et al. NATURE
- Lectin-Mediated Resistance Impairs Plant Virus Infection at the Cellular Level
- (2012) Y. Yamaji et al. PLANT CELL
- Distinct Microbial Communities within the Endosphere and Rhizosphere of Populus deltoides Roots across Contrasting Soil Types
- (2011) Neil R. Gottel et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Key physiological properties contributing to rhizosphere adaptation and plant growth promotion abilities of Azospirillum brasilense
- (2011) Sharon Fibach-Paldi et al. FEMS MICROBIOLOGY LETTERS
- A jacalin-related lectin-like gene in wheat is a component of the plant defence system
- (2011) Yang Xiang et al. JOURNAL OF EXPERIMENTAL BOTANY
- Independently Evolved Virulence Effectors Converge onto Hubs in a Plant Immune System Network
- (2011) M. S. Mukhtar et al. SCIENCE
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- Average genome size: a potential source of bias in comparative metagenomics
- (2010) Bánk Beszteri et al. ISME Journal
- NADPH-dependent Reductases Involved in the Detoxification of Reactive Carbonyls in Plants
- (2010) Yasuo Yamauchi et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- The Vibrio cholerae type VI secretion system displays antimicrobial properties
- (2010) D. L. MacIntyre et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Conserved Fungal LysM Effector Ecp6 Prevents Chitin-Triggered Immunity in Plants
- (2010) R. de Jonge et al. SCIENCE
- Diazotrophic endophytes of native black cottonwood and willow
- (2010) Sharon L. Doty et al. SYMBIOSIS
- Overexpression of a wheat jasmonate-regulated lectin increases pathogen resistance
- (2009) Qing-Hu Ma et al. BIOCHIMIE
- Type III Protein Secretion in Plant Pathogenic Bacteria
- (2009) D. Buttner et al. PLANT PHYSIOLOGY
- Phylogenetic Logistic Regression for Binary Dependent Variables
- (2009) Anthony R. Ives et al. SYSTEMATIC BIOLOGY
- Genome-Scale Identification of Legionella pneumophila Effectors Using a Machine Learning Approach
- (2009) David Burstein et al. PLoS Pathogens
- Molecular Mimicry by an F-Box Effector of Legionella pneumophila Hijacks a Conserved Polyubiquitination Machinery within Macrophages and Protozoa
- (2009) Christopher T. Price et al. PLoS Pathogens
- 60Ma of legume nodulation. What's new? What's changing?
- (2008) J. I. Sprent JOURNAL OF EXPERIMENTAL BOTANY
- Evolution of Mammals and Their Gut Microbes
- (2008) R. E. Ley et al. SCIENCE
- A Rapid Bootstrap Algorithm for the RAxML Web Servers
- (2008) Alexandros Stamatakis et al. SYSTEMATIC BIOLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search