Challenging Ancient DNA Results About Putative HLA Protection or Susceptibility to Yersinia pestis

Palaeoecological data indicates land-use changes across Europe linked to spatial heterogeneity in mortality during the Black Death pandemic

(2022) A. Izdebski et al.   Nature Ecology & Evolution

Analysis of genomic DNA from medieval plague victims suggests long-term effect of Yersinia pestis on human immunity genes

(2021) Alexander Immel et al.   MOLECULAR BIOLOGY AND EVOLUTION

Annotation of Potential Vaccine Targets and Design of a Multi-Epitope Subunit Vaccine against Yersinia pestis through Reverse Vaccinology and Validation through an Agent-Based Modeling Approach

(2021) Azaz Ul Haq et al.   Vaccines

Advances in the Evolutionary Understanding of MHC Polymorphism

(2020) Jacek Radwan et al.   TRENDS IN GENETICS

Improved Prediction of MHC II Antigen Presentation through Integration and Motif Deconvolution of Mass Spectrometry MHC Eluted Ligand Data

(2020) Birkir Reynisson et al.   JOURNAL OF PROTEOME RESEARCH

Human leukocyte antigen susceptibility map for SARS-CoV-2

(2020) Austin Nguyen et al.   JOURNAL OF VIROLOGY

NetMHCpan-4.1 and NetMHCIIpan-4.0: improved predictions of MHC antigen presentation by concurrent motif deconvolution and integration of MS MHC eluted ligand data

(2020) Birkir Reynisson et al.   NUCLEIC ACIDS RESEARCH

Binding affinities of 438 HLA proteins to complete proteomes of seven pandemic viruses and distributions of strongest and weakest HLA peptide binders in populations worldwide

(2020) Rodrigo Barquera et al.   HLA

HLA tapasin independence: broader peptide repertoire and HIV control

(2020) Arman A. Bashirova et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Like wings of a bird: functional divergence and complementarity between HLA-A and HLA-B molecules

(2020) Da Di et al.   MOLECULAR BIOLOGY AND EVOLUTION

UniProt: the universal protein knowledgebase in 2021

(2020) et al.   NUCLEIC ACIDS RESEARCH

HIV peptidome-wide association study reveals patient-specific epitope repertoires associated with HIV control

(2019) Jatin Arora et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Divergent Allele Advantage at Human MHC Genes: Signatures of Past and Ongoing Selection

(2018) Federica Pierini et al.   MOLECULAR BIOLOGY AND EVOLUTION

Ancient DNA study reveals HLA susceptibility locus for leprosy in medieval Europeans

(2018) Ben Krause-Kyora et al.   Nature Communications

The HLA-B landscape of Africa: Signatures of pathogen-driven selection and molecular identification of candidate alleles to malaria protection

(2017) Alicia Sanchez-Mazas et al.   MOLECULAR ECOLOGY

Population genetic analysis of the DARC locus (Duffy) reveals adaptation from standing variation associated with malaria resistance in humans

(2017) Kimberly F. McManus et al.   PLoS Genetics

Historical Y. pestis Genomes Reveal the European Black Death as the Source of Ancient and Modern Plague Pandemics

(2016) Maria A. Spyrou et al.   Cell Host & Microbe

HLA class I molecular variation and peptide-binding properties suggest a model of joint divergent asymmetric selection

(2016) Stéphane Buhler et al.   IMMUNOGENETICS

Computer simulation of human leukocyte antigen genes supports two main routes of colonization by human populations in East Asia

(2015) Da Di et al.   BMC EVOLUTIONARY BIOLOGY

Relative Expression Levels of the HLA Class-I Proteins in Normal and HIV-Infected Cells

(2015) Richard Apps et al.   JOURNAL OF IMMUNOLOGY

The Onset of Lactase Persistence in Europe

(2014) Pascale Gerbault   HUMAN HEREDITY

Major Histocompatibility Complex Genomics and Human Disease

(2013) John Trowsdale et al.   Annual Review of Genomics and Human Genetics

Current perspectives on the intensity of natural selection of MHC loci

(2013) Yoshiki Yasukochi et al.   IMMUNOGENETICS

Human genetic differentiation across the Strait of Gibraltar

(2010) Mathias Currat et al.   BMC EVOLUTIONARY BIOLOGY

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources